Xenorhabdus doucetiae: XDD1_1310
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Entry
XDD1_1310 CDS
T03784
Name
(GenBank) RTX toxin ABC transporter
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XDD1_1310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xdo02000
]
XDD1_1310
02044 Secretion system [BR:
xdo02044
]
XDD1_1310
Transporters [BR:
xdo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
XDD1_1310
Secretion system [BR:
xdo02044
]
Type I secretion system
RTX toxin transporter
XDD1_1310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
AAA_22
ABC_ATPase
DUF87
AAA_18
AAA_29
nSTAND3
RsgA_GTPase
AAA_33
Motif
Other DBs
NCBI-ProteinID:
CDG17009
UniProt:
A0A068QQC9
LinkDB
All DBs
Position
complement(1303177..1305294)
Genome browser
AA seq
705 aa
AA seq
DB search
MNEIEKTTISLINLIIMISNKNHATTSNKNLNNDDDYISTLNRLKKECHIKIKNKYSINK
KLGEISLPAILFGNDGQPFILAKYDEQRVLIQKPNQATPEILGKEEFINLWSGRWIKIKQ
KSNQFNIGWFIPEFVRQKKNLAEILLFSFVLQLLALISPLVVQVVMDKVLVHQALSTLDV
LIFGLVAAGLIEIILRGLREYQYAHTANRIDIKLGLKLVRHLFGLPLLFFKSRQVGAIVT
RVRELETIREFLTGSMFTLCIDVLFMFVFLYVMSLLSGLLTLIFLLTLPCYALLAWWVTP
KIEKAVEKQFTHAAINTSFLTETVAGAETLKSLAAEPRFIRRWDSQTEQMVSTSYDVQQW
DNRSGHLVTVLQKVTSAVIIWLGASQVLSLHMTIGQLIAFNMMVSHTQQPLSKLVQLWGQ
FIRSRIAIDKLGDMLNLPTEQQSGNHQVALQGAISFADIVFRYQPDLPPTINHFTLDIRA
GETVGVVGTSGSGKSTLARLLLRLYTPESGAITLDGIPLQHLNIEAIRQQIGIVLQENFL
FNKTVYENLSQSCPDAPLSAVIEAAKLAGAHDFILKLPMGYDTVIAEGGQSLSGGQRQRL
AIARTLLSDPKILILDEATSALDDESQAIIQSNMAAIAQGRTVITIAHRLSTVRQCDRII
VLNQGQIIEQGSHQQLLQQGQHYRKLWQLQQELKQETKQEETAHV
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatagaaaaaacaacaatatcattaattaatttaataataatgatatctaat
aagaaccatgcgaccacatcaaataaaaacttaaataatgatgatgattatatttctacg
ctaaacaggctgaaaaaagaatgccatattaaaattaaaaataaatactctataaataag
aagttaggcgaaatatctttgcctgccattttgtttggcaacgatgggcaaccttttatt
ctggctaaatatgatgagcagcgggtattaatccaaaaacccaatcaagcaacaccagag
atattaggtaaagaagaatttatcaatctatggagcggcaggtggataaaaataaaacaa
aaaagcaaccaatttaatattggctggtttatccctgaatttgtcaggcaaaagaagaac
cttgcggagatactcctgttctccttcgtcctacaacttctggctctgatctcaccgctg
gtcgtgcaggttgttatggacaaagttctcgtgcatcaggcgctttccacattggatgtc
ctgattttcgggctggtggctgccggattgattgaaatcattctgcgggggttacgtgaa
tatcagtatgcccataccgccaaccggattgacatcaaactggggttgaagctggtcagg
cacctgtttggcctgccattgctgttttttaaatcccgccaagtgggggcgattgtgaca
cgggtacgggaactggaaacgatccgggagtttttaaccggctcgatgtttaccctgtgt
atcgacgtcctgttcatgtttgtctttctttatgtcatgagcttactgtccggcctgctg
acgctgattttcctgctgaccctgccctgctatgccctgctggcctggtgggtgacgccg
aaaattgaaaaagcggtggaaaaacagttcactcatgccgccatcaatacctctttcctg
accgaaaccgttgccggagccgaaacactgaaaagccttgcggctgaaccccgctttatc
cgccgttgggatagccagaccgagcagatggtcagcaccagttatgatgtgcagcaatgg
gataaccgttccggtcatctggtaacggtgttacaaaaagtgaccagtgcggtcattatc
tggttaggggcttcacaagtgctttccctgcacatgaccattggtcagttgatcgctttc
aatatgatggtcagccacacccagcaacccttgtctaagttggtgcaactctgggggcaa
tttatccgctcacgcattgccattgataagctgggcgatatgttgaacctgccgacagag
caacaatcaggcaaccatcaggtggcattgcaaggggcaatctcatttgctgatatcgtc
tttcgctatcaaccggatcttccccccaccatcaaccatttcacgctggatattcgggcg
ggggaaaccgtgggcgtcgtcggcacctccggttcgggaaaaagcacccttgcccgtttg
ctgttacggctttacaccccggaaagtggcgctattacgctggatggcattcctttgcaa
catcttaatattgaagccatcaggcagcagatcggtatcgttctgcaagaaaactttctg
tttaataaaaccgtgtatgagaatttgtctcaatcctgccctgatgccccgttatccgca
gtgattgaggcggcaaagctggcaggggcacacgattttattctcaaattgccgatgggg
tatgacacggtgatcgcggaaggggggcaatcgctctcgggcggtcagcggcagcgtctg
gccattgccagaaccctgttatccgatcccaagatcttgatcctggatgaagcgaccagc
gcactggatgatgaatcacaagccatcattcaatccaatatggccgcgattgcccaaggc
agaacggtgatcaccattgcccaccggctttccacggtgcgccaatgtgaccggatcatt
gtcttaaaccaaggccaaatcattgaacaaggtagccatcaacagcttctgcaacaaggc
caacactaccggaaactttggcagttacaacaagagctaaaacaagaaacaaaacaggag
gagactgcccatgtttaa
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