Xenorhabdus doucetiae: XDD1_1340
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Entry
XDD1_1340 CDS
T03784
Symbol
sdhA
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo00020
Citrate cycle (TCA cycle)
xdo00190
Oxidative phosphorylation
xdo00650
Butanoate metabolism
xdo00720
Other carbon fixation pathways
xdo01100
Metabolic pathways
xdo01110
Biosynthesis of secondary metabolites
xdo01120
Microbial metabolism in diverse environments
xdo01200
Carbon metabolism
Module
xdo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xdo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xdo_M00149
Succinate dehydrogenase, prokaryotes
xdo_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XDD1_1340 (sdhA)
00650 Butanoate metabolism
XDD1_1340 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
XDD1_1340 (sdhA)
00720 Other carbon fixation pathways
XDD1_1340 (sdhA)
Enzymes [BR:
xdo01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
XDD1_1340 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
Pyr_redox_2
DAO
FAD_oxidored
Thi4
FAD_binding_3
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
CDG17039
UniProt:
A0A068QQF4
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All DBs
Position
1349311..1351077
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AA seq
588 aa
AA seq
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MKLPVREFDAVVIGAGGAGMRAALQISQMGLSCALISKVFPTRSHTVSAQGGITVALGNT
HDDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYSLDLVKNQDGAIVGC
TAICIETGEVVYFKAKATILATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKITGQALTVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRSAGLHLK
ECLMEQGSSRDASESDVDVALQRLNRWNNTRSGEDPVEIRKALQSCMQHNFSVFREGEAM
AKGLDELKVIRERLKNARLDDTSSEFNTQRIECLELDNLMETAYSTAVAANFRTESRGAH
SRFDYPERDDANWLCHSLYLPQTESMTRREVNMQPTLREAFPPKVRSY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgccagtaagagagtttgacgctgttgttattggtgccggtggtgcaggtatg
cgtgctgcactgcaaatttcacaaatgggtttatcttgtgccttaatttccaaggtattc
ccaacgcgttcccacactgtatcagcacagggtgggatcacggttgctctgggcaatacc
catgatgataactgggaatggcacatgtacgatacggtgaaaggctccgattacatcggt
gaccaggatgctatcgagtatatgtgtaagactggcccggaagccattttggaactggaa
cacatggggctgccattctcccgtttggatgatggccgtatttaccaacgtccattcggt
gggcaatctaagaattttggtggcgagcaggcagctcgtactgcggcggcggccgaccga
accggtcacgccttattgcatacgctatatcagcagaatttgaagaatcacacgacgatt
ttctctgaatggtattcgctggatctggttaagaatcaggacggtgcgattgtgggttgt
actgctatctgtattgaaaccggtgaagtcgtttatttcaaagccaaggcaaccattttg
gcaactggtggggctggtcgtatttaccaatccacaaccaatgcacatatcaataccggt
gatggtgtgggcatggcgctgcgtgctggcgttcctgtccaagatatggaaatgtggcaa
ttccacccaacgggtattgctggtgcgggcgtgctggtcacagaaggttgccgtggtgaa
gggggttacctgctgaataaagatggcgagcgcttcatggagcgttatgcacccaatgcc
aaagaccttgctggccgcgatgtagtcgcacgttctatcatgattgaaatccgtgaaggc
cgtggttgtgatgggccatggggacctcacgcgaaattgaaattggatcatctgggcaag
gatgtattggaatcccgcctgccgggtatccttgaactatcccgcactttcgcccatgtc
gatccagtaaaagagccgattccggttatcccaacctgtcactatatgatgggcggtatt
ccaaccaaaatcacgggtcaggcattgaccgtcaacgaaaaaggtgaagatgttgtgatt
ccgggtttgtttgccgtgggtgaaattgcctgtgtctctgttcacggcgcaaaccgtctc
ggtggtaattcactgctcgatctggtggtattcggtcgctccgctggcctgcatttgaaa
gagtgcctgatggagcaaggaagtagccgtgatgccagcgaatccgatgttgatgttgca
ctgcaacgtctgaaccgctggaataacacccgttcaggggaagatccggttgaaatccgc
aaagccttgcaatcctgcatgcagcataacttctcagtattccgcgaaggtgaggcgatg
gcaaaaggattggatgaactgaaagtgatccgcgaacgcctgaaaaatgcgcgtctggat
gatacttcgtcagaatttaatactcagcgtatcgaatgcttggaattggataacctgatg
gagacggcttattcgacggctgttgcggcgaatttccgtacagaaagtcggggtgcccat
agccgttttgactatccagagcgtgatgatgctaactggctgtgtcatagcctgtattta
ccgcaaactgagagcatgacgcgtcgtgaagtgaatatgcagccaacactgcgtgaagct
ttcccgccgaaagtgcgttcttactaa
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