Xenorhabdus doucetiae: XDD1_1580
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Entry
XDD1_1580 CDS
T03784
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo00541
Biosynthesis of various nucleotide sugars
xdo01100
Metabolic pathways
xdo01250
Biosynthesis of nucleotide sugars
Module
xdo_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
XDD1_1580 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xdo01005
]
XDD1_1580 (kdsB)
Enzymes [BR:
xdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
XDD1_1580 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
xdo01005
]
Lipid A
XDD1_1580 (kdsB)
BRITE hierarchy
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Motif
Other DBs
NCBI-ProteinID:
CDG17279
UniProt:
A0A068QR89
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Position
1577148..1577897
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AA seq
249 aa
AA seq
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MFTVIIPARFASTRLPGKPLADIHGKPMVVRVMERAVRSGAYRVIVATDNQDVFDAVTAA
GGEVCMTSENHHSGTERLAEVIDKYQFADDEIIVNVQGDEPLIPEQIIKQVADNLAGSDA
GMATLAVPIQDAEEAFNPNAVKVVMDAKGYALYFSRATIPWERDRFMQSKETIGDHFLRH
IGIYAYRAGFIRRYVQWAPSPLESIEMLEQLRVLWYGEKIHVAKALQAPGAGVDTPEDLD
AVRKVFTAI
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccgttattattccggcacgttttgcttcaacccgtttaccgggaaaaccactg
gccgatattcatggcaaaccaatggttgtgcgtgtgatggaacgggctgtccgttccggg
gcttaccgggttattgtagcaacggataatcaagacgtttttgatgcagtgactgccgca
ggcggtgaggtttgtatgacaagcgaaaatcaccattcgggtacagaacgtttggctgag
gttatcgataaataccaatttgcggatgatgaaattattgtgaatgtgcagggtgatgaa
ccccttattccagaacagatcattaagcaagtggccgataatttagctggcagtgatgcc
gggatggcaacgcttgccgtgccgatccaggatgcggaagaggcattcaatcctaatgcg
gtcaaagtggttatggatgcgaaaggttatgcgctctatttctctcgtgcgactatcccg
tgggaacgggatcgttttatgcagtcaaaagagacgattggagaccatttcctgcgtcat
attggcatttatgcttatcgggcggggtttatccggcgctatgttcaatgggcaccaagt
ccgctggaaagtatcgaaatgctcgaacaattaagggtgctttggtacggtgaaaaaatt
catgtcgcaaaagcattgcaggcacccggtgccggtgtagatacacccgaagatctggac
gctgtcagaaaagtttttaccgcgatctaa
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