Xenorhabdus doucetiae: XDD1_1626
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Entry
XDD1_1626 CDS
T03784
Name
(GenBank) putative Outer membrane autotransporter barrel
KO
K19231
fibronectin-binding autotransporter adhesin
Organism
xdo
Xenorhabdus doucetiae
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xdo02000
]
XDD1_1626
Transporters [BR:
xdo02000
]
Other transporters
Pores ion channels [TC:
1
]
XDD1_1626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
PATR
Pertactin
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
CDG17325
UniProt:
A0A068QU12
LinkDB
All DBs
Position
1632343..1637070
Genome browser
AA seq
1575 aa
AA seq
DB search
MKIYRKAILPIALRVALFFPGISVHAVAASSCGSSGTTTTICDNQTQPYNVSAGENLIIE
KRASIDVPQGVDKDHSDSYNLKYSAVNVGSNQDLDPVISVDSIENNGILQGSGGVTVTYS
GSVGKLLNHGSISGNSGAIWVSGHIGTLDNDGVIKPENASDAVQSILLSYGMQNSGKGKI
ETIINRKGGSIDGISVQMAELNTLNNHGTLTSEDSFPDDGTIYIQGGGQVGIFNNDGTVT
GPNHGIVITNGGYLDTLNNQPGGKGITADQDAIQVTGQDTSGKSSKIKQITNASTIYGKQ
NGIDIDDKGVVDTIMNLDGGVIQGDKFSIHNQGTITNGIDNAGTINGNVELGGATLSMSG
SKATLNGDVHGTKDSQVIIGSKGSLDLTFTHDMDVGAVKVLSGSALRLGDGQTTGRLSGD
IDNQGDLYFNRSDKATYQHNINGAGSVHQIGSGTTILTGANTYTGETKIESGTLQLGDNG
TTGSIDKTAKVTIGQDGVLAFDHTAPTTFAADIEGIGTLRQQGTGDLTLTGNVATGKPIT
VTSGKLRFGDGTTIGKLSLSGIDNQGAVIVAGAANSEVTLGGEISGAGTLEVTGGKAIVT
GDSTYSGQTTIGKGATLQLGNGGTGGNLAKSAILNSGTLTFNPNGTRSFDGAISANGHID
KIGSGITMLNSDSSAFTGSTSVEGGTLAVDGKLGTTASTLNVKNGGTVDGTGIIGGKTTI
ESGGHLTGKRGNALTFGHDLILSSGANVDISLGAENAPASALFNVHGDLTLAGTLNVTEL
SGFAVGEYDIFNYGGTLKNNGMTFTGGKPDSLSLDTNRGKEVYLTNTGGMLLNYWDGGDP
RKYNNGTIDGGDGVWQVGGNHNWTSKTGQFNASWKNTDQFAIFAGTAGTVQVDDSGGNVT
VNGMQFSSDGYKITGASLVLENDQGGSAKIRVGTGNKSKAGWVATIESDLTGSATLETTD
YGTLILKGKNGYTGGTKVTRGVLQVGDGGIQGSISGDVAIGSEGKLVFNRADQMKFSGSL
KGQGQLVQAGSGTTLLTGVNTYAGTTEVQGGTLRQGAEGAFSAVSSHTVGEHGTLDMGGF
NATVSALNNSGTVLAGGDDKAVGRTLTITGNYSGNNGMVNLSTVLEGDNSKTDRLVVNGS
TSGTTHLAIKNVAGNGAPTKEGIKVVEVQGTSDGTFSLAGDYRYKGEPAVVAGAYAYRLY
KNGTDNTDGSWYLRSSLTSPEPKPDPKPEPKPKPEPPRLYHAGVSVYEAYGRVLQTLNTP
ETLRDRTEGRKAQRLGKDEFRSSAGEGSTDESTSNGAWGRMTASYGKLSPHVSTSGADAI
TYNMVRAQVGMDKRFYENNQGSVTGGGFLQYSNVNANVGSVHGEGNIRANGYTLGTTSTW
HGNNQFYLDGLAQVTYFGNDLNSKTASRHLGDNKSALGYALSLEAGQQFDLTPEWSLTPQ
AQLAFSSVKMNDFHDTFGTKIRFDQSESMKLRLGTTIDYRQKWRDEQNKDGKAANLYGLF
NIRQELLGRNDTVDVADVTFHAGNDRTWAESGVGGSYSWNDNNSFVYGQTSVNTSLNNFA
DSYELSAKIGLKATW
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatatcgaaaagcgatattgccaatagcccttagagtggctttatttttccca
ggaatcagtgttcatgcagtagcggcttcatcatgcggctcttcaggtacgacgaccact
atttgcgataatcagacccaaccctataacgtatcagctggcgaaaatctgattatcgag
aaaagggcatctattgatgtcccccaaggggtggataaggatcactcagatagctacaac
ttgaaatacagtgcggttaatgttggcagtaaccaagatctggatccggtgatttcagtc
gatagcattgagaataatggaatattgcaaggaagtggtggcgttaccgtaacttatagc
ggttccgttggaaagctgcttaatcatggaagcataagtggaaattcaggagccatatgg
gtttctggtcatataggaacgttagataatgatggcgtcatcaaaccagaaaatgcttct
gacgcagttcagtcaatcttactcagttatgggatgcagaatagcggtaaagggaaaata
gagaccatcattaatcggaagggaggatcgattgatgggatatctgtccaaatggcagaa
cttaacacgcttaataaccatgggacgctgacatctgaggacagttttccagatgatgga
acgatctatattcaaggtggcggtcaggtcggcatttttaataatgatggaactgtgacc
ggacccaatcatggcattgttattaccaatggcggatacctcgacacgctcaataatcag
cctgggggtaaagggatcacggctgatcaggatgctattcaggtcactgggcaagataca
tctggcaagtcgtccaaaattaaacagattaccaacgcttctacgatatatggaaagcaa
aatggcattgatatcgacgataaaggcgtggttgataccataatgaatttggatggtggc
gtgatacaaggagataaattttctatccataatcagggaaccattaccaacggtattgat
aatgccggcacgattaacggcaatgtggagcttggcggtgccactctttctatgtctggc
tcaaaggcaaccctcaatggtgatgttcacggcaccaaagattcacaggttatcattgga
agtaaaggatctctggatctgacatttactcacgatatggatgtcggggctgttaaagta
ttatcgggaagtgcgttacgtttgggggacgggcagacaacaggccgcctttccggtgac
attgataatcagggagacctctattttaaccgtagcgataaggcgacctatcaacacaat
ataaacggagcaggttctgttcatcaaataggtagtggcacaaccattttgacaggcgct
aacacttataccggtgagacaaaaatcgaatcgggtaccttgcaactcggcgataacggg
acgacgggaagtattgataaaacggccaaggtgaccatcgggcaggatggcgtactggct
tttgaccacacggctcccaccacttttgcggctgatattgaaggtatcggcacgcttcgc
caacagggaacgggtgatttgaccctgaccggtaatgtggctacgggtaaaccgattacc
gtgacatcaggcaaactgcggtttggcgatggcaccacaatcggcaaactctcactttcc
ggcattgataatcagggcgcagtaattgttgccggtgcggctaacagtgaggttaccctt
ggtggtgaaataagcggagcggggacgttggaagtcaccggagggaaagccatcgtgacc
ggtgacagcacctattcaggccagacgaccattggcaagggtgccacgttgcaactcggc
aatggcggcacgggtggaaaccttgccaagagcgctattttaaacagcggtaccctgacg
ttcaatccgaatggaacccgcagctttgacggtgctatttccgcaaatggtcatatcgac
aagattggctccggcatcacaatgctgaattcggattcctcggccttcacaggatcaaca
tcggttgaaggcggaacgcttgctgttgacggtaagctaggcacaacagcgtcgaccctc
aatgttaaaaatgggggaactgttgatggtaccggcatcattggcggtaagacaacgatt
gaaagtggcggtcatcttaccggcaaacgcggtaatgctctgacatttggccatgatctg
atcctcagcagtggcgcaaatgtggatatttcgcttggggcggagaatgcccctgcgtct
gcattgtttaatgtgcatggcgatctgacactggcaggaacgcttaatgtcacagaactt
agtggtttcgctgtgggtgaatacgatattttcaattatggcggcaccttaaaaaataat
ggaatgacattcacgggtggaaaaccggattcgctctctctcgatacgaatagaggtaag
gaggtttatctcaccaatacgggcgggatgctcctgaactattgggatgggggtgatccc
cgcaaatataacaatggcaccattgatggtggcgatggtgtttggcaggtcggtggaaat
cataactggacgtcaaaaactgggcaattcaatgccagttggaaaaataccgatcagttt
gccattttcgctggtacagcgggaacggtgcaggtagatgatagcggcggcaatgtcacg
gtaaatggtatgcagtttagctctgatggttacaaaatcacgggggcttctctggtctta
gaaaatgatcaaggaggcagtgccaaaattcgcgttggaacgggaaataagtcaaaagcg
ggctgggttgcgacgattgaatcagacctgacgggttcggcaacgcttgagaccacagat
tacggaacgttaattttaaaaggtaagaatggctacacggggggcacgaaagtgacacgg
ggtgtccttcaggttggtgacggtggcatccaaggcagtatttccggtgatgtcgccata
ggcagtgaagggaaacttgtcttcaaccgtgccgatcaaatgaaattttctggttcctta
aaaggacaagggcaattggtgcaggccggtagcggaacaaccctcctgacaggcgtgaac
acctatgcaggtacgacagaagtacagggggggacgcttcgccaaggggcagagggagct
ttcagcgccgtttcatcccatactgtcggggagcacggtacgctggatatgggcggattt
aatgcgacagtttccgcgttgaataacagtggcaccgtcttggctggcggagatgacaaa
gccgtagggcgtacactgacgatcacgggtaattatagcggcaataacgggatggtgaat
ttatcgaccgtgttggaaggcgataactcaaagactgacaggcttgtggtgaacggcagc
acatctggtacaactcacctcgcgattaaaaatgttgctgggaacggtgcaccgacgaag
gaaggtatcaaggttgtcgaagtgcaagggacatcggacggcactttcagtttggcaggt
gactatcgctataagggagagccggccgttgtcgctggtgcctatgcttatcgtctttat
aagaatggcacggacaatacggatggaagctggtatctgcgttcgtcactgaccagtccg
gaacccaagccagatcctaaaccagaacccaagcccaaaccagaaccgccgcgactttat
catgctggtgttagcgtttatgaggcttatggccgggtgttgcagacgttgaatacacca
gaaactttgcgtgaccgaaccgaggggcgtaaggcgcaaagacttggcaaagatgagttc
agaagcagtgctggcgagggcagcacagacgagagtacaagcaatggggcatgggggcga
atgaccgcctcatacggtaaattgtcgccacatgtctcgacatccggtgcggatgcgatc
acctacaacatggtccgtgctcaggttggcatggacaaacgtttttatgaaaataaccaa
ggttcagtcactggcggtggtttcctgcaatattcgaatgttaatgctaatgtaggttct
gtgcatggtgaaggtaatattcgggcaaatggttatacgctaggcacgacaagcacgtgg
cacggcaataatcaattttatttggatggattggctcaggtgacctactttggcaatgac
ctgaattcaaagacggccagccggcatttgggagataataagtccgcgctgggatatgcg
ctaagcctggaagcaggacaacaatttgacttgacgccggaatggtcactgactccgcaa
gcgcagctcgctttctcttctgtcaagatgaatgatttccatgacacgtttggaaccaaa
atccgctttgaccaaagcgagagcatgaaacttcgcttaggcacgacgatagattatcgt
caaaaatggcgtgatgagcagaataaggatggaaaagccgcaaatctttacggtcttttc
aacattcgtcaggagcttttggggcgtaatgacacggttgatgttgctgatgttaccttc
cacgctgggaatgaccgcacgtgggcggagagcggtgtcggtggttcctacagttggaat
gataataattctttcgtctatggtcagacttcagttaataccagcctgaataattttgcc
gacagctacgagctaagcgcaaaaattggtctaaaagcgacttggtaa
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