Xenorhabdus doucetiae: XDD1_1916
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Entry
XDD1_1916 CDS
T03784
Name
(GenBank) conserved protein of unknown function
KO
K04067
primosomal replication protein N''
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XDD1_1916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xdo03400
]
XDD1_1916
DNA repair and recombination proteins [BR:
xdo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XDD1_1916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
Pkinase
AAA_11
DUF4011
PK_Tyr_Ser-Thr
AAA_19
SLFN-g3_helicase
nSTAND3
UvrD-helicase
DEAD
ResIII
DUF7032
PhoH
Zn_Ribbon_1
AAA_6
Motif
Other DBs
NCBI-ProteinID:
CDG17615
UniProt:
A0A068QUS1
LinkDB
All DBs
Position
1963054..1969155
Genome browser
AA seq
2033 aa
AA seq
DB search
MAMMRFCPHCQTERPLTEIFCEGHIGTQPCGWDLSAEPIHESGRRPQQPASTPTVEFVDA
ELQEHIYACVNGHPMEEGDLMCLQCGADAAEFSAENPAGQDTIPSPAEPIAIGEWLLGER
INNSDSPRERYNVTHRETRRQGVLTLYPLGEEPDQSVYNVFRLLPQNHVPALLDTGRQHG
RPWHVAEHIPGGSLEAFIIQGDYWQPEEIPQLIREMGQALAAFAEHGLRHRALRPSHLLI
RQRSPLDIVIIEFGSACLSEFDLDIVSPLDISRYSAPETLAGGVSAASDWWSLGIILLEQ
FTRGRCFEQIHTHAFLIQIMTHGVTIPDDLDDNIRILLRGLLTRDRKLRWQWPEVSAWLE
GKPVAVPEEINPQQPQHGLKLTLAGQVYSQPALFALKAAETAQWDEALSLLLRGELFSWL
AGMSHYESIHPQLRLFADTPELDDNLRLMMTLKVLNPDMPFIYRGEIITPSWLLEHADIS
YRLINDPLAQLLQKIDTKHWLVQLYHRQQRTRSRAEALEIALDEKILKIYLLITSHSQLI
VRWQAHHQLFPDTHHSGLRTLIDRQNLQDEDLILLLGADIGQFIARQTLLDQAGKLARHY
RISTFDSKQAEALLQLPRLTLYQQLTERIGDFCRCGIADIDEWAEQFLLTRRLPLEQVIV
MLAIAAEQWVVPEKQRYIQQVMQFFTRKITANTQRGSLVRMRLTPSAGRVDLIELDGVQK
NDVQKNSAQKNSGRKSAQDLLQHLINRSKNAIAIDSQTLLLTPKVNDRLRVLQAQTELYQ
RDTGINGLYLGFPFLLIHTQPSQMKPRIAPLFLWPVNLVMNAGLRGVARLQFDNERGAIR
LNPALASLNGIPPIKEWQAILDQLLGQAGLTVDSVMEKLSAVMPVTATQLSALPSDAEIE
ENSSSLYCSAVLFHTSFIGQAIGNDLQQIAGLPIANTALEKALGLSESETSKPVPLKTEE
RYFVNATDPSQETVVAAARQNRGLLIEGPPGTGKSQTIVNLIADTIGQQKTALVICQKPA
ALEVVYKRLVACGLINRIVLVHQAQKGRDIIQSVRSQIDELFLREKNGVQTINWGHKRNI
AARRMGKYETQLDNYYNGLYQYHEAAGCSYRQLMASLIALRDNSEVCLDLPQLLSLFCSS
DAVEATGIIEDIVQVAPVWLAADYENSPLSQLRFFPADDDSCQQFKRDFTGFMQVEAARE
QTLTLPDTQITIETLTHHQAALAACKTAFAALSPLTWQQFARWLPLFCNEKGQQPRGQQM
ISQLAALIARLQQVDISLCDPRLFHLLAKCENPILAQLSLALKEKQQASFWFYLNPFYYA
RQRQLNAFFATHGINHHPAQYAAFSHSIRAEQTWRLIRNELNQLHQQLEIEACFEPDAFL
LLQALENTTDNLRRIADLAQLVVNYPQPAHLLSAISDGQQVGFFQQCLEIETAITRAQAQ
EKSRTALNALIPYLTSQTQQRFAEAITHQTSLNHDLAVIAAAFPTLKPYLQFSALSENFD
EAHWTILAQLRPYADEFSRLSDTVLRQTIKKTLQHYYYLSLSALFERQFPALSTGQDTLD
HHVQQLEHTLADLQALNREAFNKGLEYPQISPRRVWEEITRLTGKRARRLREFIEEGKAL
GLMHLRPVWLMTPDVASQVLPLKAGFFDTVIYDEASQMPIEYALPTLYRGKRMIVSGDEK
QMPPSSFFAGSVNDLFNNDEDDDEENDSPEQQQENPQNQWNYRQIGECPDLLHLARAVLP
VYTLDIHYRSVYRDLINFSNHAFYEKRLNIPAQHSEKVLNKIKPLSLERINGTYINQTNP
DEAEAIVTRLAEIWLEPFENRPSVGIVTFNQKQTQLIQHLLIERTETDTNFHQAYMQETQ
RREQGEDMSLFVKNVENVQGDERDVILFSTTFGRNKQGAFRRHFGVLGQTGGERRLNVAI
TRARKQVVIFSSMPLDEISDLLSTYRKPDIPRDFLQGYLTFAHNLTTGQNEHNQALLNRM
CRTDTGQHDSNRTHDGFVQSVVNFVQQFEQQFEQQQGWQIADSRSTAGRGFLF
NT seq
6102 nt
NT seq
+upstream
nt +downstream
nt
atggctatgatgcgtttttgcccccattgtcagaccgagcggccactgaccgaaattttc
tgtgaaggtcatatcggcacacagccgtgcggatgggatttatctgccgaacctattcat
gaatcaggccggcgtccgcaacagccggccagcacaccaacggtagaatttgttgatgca
gagcttcaggagcatatctatgcttgtgtaaacggtcacccaatggaagaaggtgatctt
atgtgtctgcaatgtggtgcggatgctgccgaattctctgcggaaaacccggctgggcag
gacacaataccttcaccggcagaaccgatagctatcggagagtggctgttgggtgaacgg
atcaataacagtgatagtccgcgtgagcgctacaatgtgacccatcgggaaacccgccgg
cagggggttttaacactttatccgttgggtgaagagcctgatcagtctgtttataatgtg
ttccggcttttaccgcaaaatcatgtgccggcgttgctggacacaggccgtcaacacggc
agaccgtggcatgtggcagagcatattcccggtggttcgttagaggcatttattattcag
ggcgactattggcaaccggaagagatccctcagcttatccgggaaatgggtcaggcactg
gctgcttttgctgagcatggtttacgtcatcgcgccctgcggccttcccaccttttgatc
cgtcagcgctcaccactggacattgtgatcatcgaatttggttctgcctgtctgtcggaa
ttcgaccttgatatcgtctcaccgctggatatcagccgttacagtgcaccagaaacctta
gccggcggagtttccgctgcttctgactggtggagtctggggattattctgcttgaacag
ttcacccgtggccgctgctttgaacagattcatacccatgcatttctgattcagataatg
actcatggtgtcaccattccggatgatttggatgacaatatccgcattctgctgcgtgga
ttattaacccgtgacagaaaattgcgttggcagtggccggaagtatcagcatggctggaa
gggaaacctgtcgcggtgccggaagagataaatccgcaacagccacagcacgggctaaag
cttactctggccgggcaggtctatagccaaccggcactgtttgcgctgaaagccgcagaa
accgcgcaatgggatgaagccttgtccttattattacgcggagaacttttctcatggctt
gccggaatgagccattatgaatcaatccacccgcaattacgcctttttgctgatactcca
gagcttgatgacaatctgcgcctgatgatgactttaaaggtgctgaatccggatatgccg
tttatttatcgcggtgagatcatcacaccttcctggctattagaacatgcagatatcagt
taccgtctgattaatgatccgttggcgcaattattgcagaaaatcgataccaaacactgg
ctggtgcagctttatcatcgtcagcagcggactcgcagtcgggcagaggcgctggaaatc
gcccttgatgaaaagatactgaaaatctatttgctgattacttctcatagccagcttatt
gtccgctggcaggcgcatcatcagttatttcccgatacacaccacagtggcttacggaca
ctgattgacaggcagaatttacaggacgaagaccttattctattgttgggtgcagatatc
gggcagtttattgcacgccagacattactggatcaggccggtaaactggcaagacattat
cgtatcagcacatttgacagcaagcaggcagaagcgttattgcagttgccccgtctgacg
ctatatcagcaactaacagagcggatcggtgatttttgccgatgcgggatcgctgatatt
gatgaatgggcagaacagtttttactgacacgacgcctgccgcttgaacaggttatcgtc
atgttggcgattgccgcggaacaatgggtcgtaccggaaaagcagcgctatattcagcag
gtcatgcagttttttacccgcaaaattaccgcaaatacgcagcgggggtctttagttcgt
atgcgtctgaccccatcagccggtcgggttgatctgattgaactggatggtgttcaaaaa
aatgatgttcagaaaaatagtgctcagaaaaatagtggacggaaaagcgcgcaggatctg
ttacagcatttaattaaccgctctaaaaatgcgattgccattgatagccagaccttattg
ttgacgcccaaagtcaacgatcggctacgagtgttacaggcacaaaccgagttatatcag
cgtgataccggtataaacggtctgtatctgggatttccgttcctgcttattcatacccaa
ccgtcacagatgaagccccgcatcgcgccgctgtttctctggccggttaatctggtgatg
aatgccgggctgcgaggggttgcccgcttgcagtttgataatgaacgtggagccataaga
cttaatccggcactggccagcctgaacggtattccgccgatcaaagagtggcaggcgatt
ttggatcagcttctcggacaggccggactgacggtcgatagtgtgatggagaagctctcc
gctgttatgccggtgacggccacacagttatccgcattaccctccgatgcggaaatcgaa
gaaaatagctcatcgttgtattgttctgccgtacttttccacacgtcatttatcgggcaa
gctattggcaacgatttgcaacaaatcgcgggcttgccgattgcaaatacggcactggag
aaagccttgggattgtcggagtccgaaacgtcaaagcctgttccgttaaaaaccgaagaa
cgttattttgttaatgcgacagatccttctcaggaaacggtggtggccgccgcccggcaa
aaccggggattgctgattgaaggcccgccgggaaccggtaaaagccagaccattgttaat
ctgattgcggataccatcgggcagcagaaaaccgcactggtgatttgtcagaaaccagcc
gcactggaagtggtgtataagcgcttggtagcctgtggcctgatcaatcgtattgtgctt
gtgcatcaagcgcagaaagggcgcgatattattcagtcggtacgctcacagattgatgaa
ctgtttctgcgtgagaaaaatggtgtccagacgataaactggggacacaagcgcaatatt
gccgcccggcgcatgggcaaatatgagacgcaactggataactattacaacgggttatat
cagtatcatgaagcggcagggtgctcttatcgtcaactgatggcctccctgattgcattg
cgtgataattcggaagtctgtcttgatttaccgcaattattgtcgctgttctgttcatcg
gatgcagtggaagcaaccggaatcattgaggatatcgtgcaggttgcacctgtatggctg
gctgccgattatgaaaatagcccgctttcacaactgcgcttttttcctgcggatgacgac
agttgtcagcagtttaagcgagattttaccggatttatgcaggtggaggcagcacgggaa
cagaccctgacactgcctgatacacaaattaccattgaaacactgactcaccatcaggcc
gctttggctgcctgtaaaacggcatttgctgcattatctccgctgacatggcaacaattt
gcccgctggttgccgttgttctgcaatgaaaaagggcaacagccacgtggtcagcagatg
atcagccaactggcagccctgattgcgcggttacagcaggtagatatttcgttgtgtgat
ccgcgtttatttcatcttctggcaaagtgtgaaaatccgatactggcacaattgtcactg
gcattaaaagaaaagcaacaggcatcattctggttttatctgaatccgttttattacgcc
cgtcaacgccaacttaacgctttttttgctacgcatgggatcaaccatcatccggcacag
tacgccgcattttctcactcaatccgtgccgaacagacatggcgcctgatccgtaatgaa
ttgaatcagttacatcagcaacttgaaatagaggcatgttttgaacctgatgccttttta
ttacttcaagcgttggaaaatacgacagataaccttcgaaggattgctgatctggcacag
cttgtggttaattatccgcagccagctcatttattaagcgcgataagtgacgggcaacag
gtcggtttttttcagcagtgccttgaaatcgagaccgcgataacgcgcgctcaggcacaa
gaaaagagccgtaccgcactcaatgcgttgattccgtatctgaccagtcagacacaacaa
cgttttgctgaagcgattacacatcagacgtcgcttaaccacgatcttgccgttatagcc
gccgcatttccgacgttaaaaccttatctgcaattcagtgcactttctgaaaatttcgat
gaggcgcattggacgatcttggcgcaattgcgcccttatgcagacgaattttcccggttg
agcgacaccgtattgcgtcaaaccatcaaaaagacactgcaacactattattacctgtct
ttgagcgcattgtttgagcgtcagtttcctgcgctatccaccgggcaggacacattggat
caccatgttcaacaactggaacacacactggcggatttgcaggcactgaaccgtgaagcc
tttaacaaaggattagagtacccgcaaatcagcccaagaagggtatgggaagagattacc
cgtttaacaggaaaacgcgccagaaggttacgggaatttatcgaagaggggaaagcgctc
ggtctgatgcacctgcgtccggtatggctgatgaccccggatgtcgccagtcaggtttta
ccgcttaaagccggtttctttgatacggtcatttatgacgaagcctctcagatgccgata
gaatatgccttaccgacgctgtatcgcggtaagcggatgattgtcagcggtgacgagaaa
cagatgccgccgtccagtttctttgcgggttcagtcaacgatttattcaacaacgatgag
gatgacgacgaagaaaacgattcaccggaacagcaacaggaaaatccacaaaatcagtgg
aattaccgccaaattggcgagtgccctgatttgttgcatctggcacgggcggtgttaccc
gtttatacgctcgatattcactatcgttctgtttaccgtgatctgattaatttctcaaac
catgcattttacgaaaaacgcctgaatatcccggcacaacattcagaaaaagtactcaat
aagataaaaccgttgtcactggagaggatcaatggaacgtacatcaatcaaactaatcct
gatgaggcggaagctatcgtaacacgcttggctgaaatctggctggaaccgtttgaaaac
cgcccctctgtcggcatcgtgacgtttaaccagaaacaaacacagctaatccaacatctg
ctgattgaacgtactgaaacagatacgaatttccatcaggcttatatgcaggaaacacag
cggcgggagcagggtgaggatatgtcgttgtttgtaaaaaacgttgaaaacgtacagggt
gatgaacgggatgttattttattctccaccacgttcggacgtaacaagcagggggctttt
cggcgtcatttcggcgtgttaggacagaccggcggagagcggcggcttaatgtcgccatt
acccgtgccagaaaacaggtggttatcttctcatccatgccattggatgaaatatctgac
ttgctttcaacctatcgcaaacctgacattccgcgtgattttttacaagggtatctcacc
tttgctcataacctgacaaccggacaaaacgaacataatcaggcgctgcttaacagaatg
tgccgcacagataccggccagcatgacagcaaccgaacccatgatggttttgtgcaatct
gtggtgaattttgtgcagcaatttgagcaacaatttgagcaacaacagggatggcagata
gccgatagccgaagtacagcaggccggggttttctattttga
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integrated database retrieval system
