Xenorhabdus doucetiae: XDD1_2061
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Entry
XDD1_2061 CDS
T03784
Symbol
aspS
Name
(GenBank) Aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
XDD1_2061 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xdo01007
]
XDD1_2061 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xdo03016
]
XDD1_2061 (aspS)
03029 Mitochondrial biogenesis [BR:
xdo03029
]
XDD1_2061 (aspS)
Enzymes [BR:
xdo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
XDD1_2061 (aspS)
Amino acid related enzymes [BR:
xdo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
XDD1_2061 (aspS)
Transfer RNA biogenesis [BR:
xdo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
XDD1_2061 (aspS)
Prokaryotic type
Other AARSs
XDD1_2061 (aspS)
Mitochondrial biogenesis [BR:
xdo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
XDD1_2061 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
CFAP90
Motif
Other DBs
NCBI-ProteinID:
CDG17760
UniProt:
A0A068QVA5
LinkDB
All DBs
Position
2118633..2120402
Genome browser
AA seq
589 aa
AA seq
DB search
MRTNYCGQLNLTHESQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKEVFAQA
SELRNEFCIQITGIVRARPDHQINQDMATGEIEVFAESLMIFNRSEPLPLDSKQNNSEEQ
RLKYRYLDLRRPEMSQRLKTRAKITSFVRRFMDEAGFIDVETPMLTKATPEGARDYLVPS
RVHKGEFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMT
AEQVREIMEKMIRELWLAVKGVDLGHFPMMTFEEAMRRFGSDKPDLRNPLELVDVADLVK
DVEFSVFADPANNPKGRVATLRVPGGAELSRKQIDEYGKFVGIYGAKGLAWVKVNNRAAG
LEGIQSPIAKFLSAEVVEGLLSRTHAQDGDILFFGADKKNIVTDAMGALRLKLGRDLNLT
DLASWKPLWVVDFPMFEDNGAGGLTAMHHPFTSPRDMSASELESDPESAIANAYDMVING
YEVGGGSVRIHRNEMQQTVFRILGINEQEQQEKFGFLLNALKYGTPPHAGLAFGLDRLVM
LLTNTDNIRDVIAFPKTTAAACLMTDAPSPANPTSLAELAISVVKKENE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactaattattgtgggcagttgaacctgacccatgaaagccagaaagtgactctt
tgtgggtgggtaaatcgtcgccgtgatttgggtggcttgatctttattgatatgcgagat
cgcgagggcatcgttcaggtattttttgacccagaccagaaagaggtctttgctcaggct
tctgaactgcgtaatgaattttgtattcaaattaccgggatcgtgcgtgcgcgccctgat
caccagattaatcaagacatggcgaccggcgaaattgaagttttcgcagaaagcctgatg
attttcaaccgctcagagccattgccgctggacagcaaacagaacaacagcgaagagcag
cgcctgaaataccgctatcttgacctgcgtcgtccagaaatgtcacagcgtttgaaaacc
cgcgcgaaaatcaccagttttgtccgtcgttttatggatgaagcgggtttcatcgatgtt
gaaaccccaatgctgactaaagcgacgccagaaggggcgcgtgactatttagtgccaagc
cgtgtgcataaaggcgaattttacgccctgccgcaatctccgcagcttttcaagcaattg
ttgatgatgtccgggtttgaccgttattaccagatcgtgaaatgcttccgcgatgaagat
ttgcgcgccgatcgccagccggaattcacccagatagacgttgaaacttcgtttatgacc
gccgaacaagtgcgcgaaatcatggaaaaaatgatccgtgaattgtggctggcggtgaaa
ggtgtcgatttgggtcacttcccgatgatgacattcgaagaagccatgcgccgctttggt
tcagataaacccgacctgcgtaacccgctggagttggtggatgttgcggatctggttaaa
gacgtggaattctctgtgtttgccgatccggccaacaatccgaaaggccgtgttgcgacg
ctccgcgttcccggtggcgcagagttaagccgcaagcagattgatgaatatggcaaattt
gtcggtatctatggtgcgaagggcctggcatgggtcaaagtgaacaaccgtgctgcgggt
ctggaagggatacaaagcccgattgccaagttcctgtccgcagaagtggttgaaggcttg
ctgtcccgtactcatgcacaagatggtgatatcctgttcttcggcgctgacaagaaaaat
attgtcactgatgcgatgggagcgctgcgcctgaaactcggccgtgacctgaatctcacc
gatctggcaagctggaaacccctttgggtggtggacttcccgatgtttgaagacaacggc
gcgggtggtttgacggccatgcaccatccattcacctctccgcgtgatatgtcggcttct
gaattggaaagcgatccagaatccgctatcgcgaatgcgtatgacatggtgatcaatggc
tatgaagtgggcggaggctctgtccgtatccatcgcaatgaaatgcagcaaaccgtattc
cgtattctgggaattaatgagcaggaacagcaggagaaatttggctttttgctgaatgcc
ctgaaatacggcacgcctccgcatgctggtctggcttttggcttggatcgcctcgtcatg
ttgctgaccaataccgacaatattcgtgatgtgatcgcgttcccgaaaacaaccgcagcg
gcctgtttgatgacggatgcgccaagcccggcgaacccaacatcattggcagaactggct
atttcagtggttaaaaaagagaacgaataa
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