Xenorhabdus doucetiae: XDD1_2084
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Entry
XDD1_2084 CDS
T03784
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo00061
Fatty acid biosynthesis
xdo00071
Fatty acid degradation
xdo01100
Metabolic pathways
xdo01212
Fatty acid metabolism
xdo02024
Quorum sensing
xdo04146
Peroxisome
Module
xdo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
XDD1_2084 (fadD)
00071 Fatty acid degradation
XDD1_2084 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
XDD1_2084 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
XDD1_2084 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xdo01004
]
XDD1_2084 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xdo04147
]
XDD1_2084 (fadD)
Enzymes [BR:
xdo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
XDD1_2084 (fadD)
Lipid biosynthesis proteins [BR:
xdo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
XDD1_2084 (fadD)
Exosome [BR:
xdo04147
]
Exosomal proteins
Exosomal proteins of breast milk
XDD1_2084 (fadD)
Exosomal proteins of breast cancer cells
XDD1_2084 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Pept_S41_N
Motif
Other DBs
NCBI-ProteinID:
CDG17783
UniProt:
A0A068QS44
LinkDB
All DBs
Position
2143687..2145381
Genome browser
AA seq
564 aa
AA seq
DB search
MEKVWLKHYPADVPAEIDPDRYTSLIEMFENAVARYADQSAFINMGEVMTFRKLEERSRA
FAAYLQNGLGLKKGARVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDS
DTSAIVIVSNFAHTLEKIVFNTPVKHVILTRMGDQLFRPKGTLVDFVVKYVKRLVPKYHL
PDAISFRSAMHKGYRMQYVKPDVQSEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKA
CYSPLLKPGQEVVVTALPLYHIFALTINCLFFIEMGGQNLLITNPRDIHGTVKELARYRV
TALSGVNTLFNAWLNNAEFQKLDFSSLRLSVGGGMAVQRVVAEKWQNLTGCHLLEGYGLT
ECSPLVSANPHNLTHYSGSIGFPVASTEIKLVGNDGNEVSPDEVGEMWVRGPQVMKGYWN
RPDATDEVLKDGWLATGDIANVDEKGFFHIVDRKKDMILVSGFNVYPNEVEEVVSSHPKV
LESAAVGVPSENSGETVKVFVVRKDPSLTEDELKTHCRHYLTGYKVPKLIEFRNELPKSN
VGKILRKELRNEELVKVDDDAATH
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaagtctggctaaaacattatccggcagatgttccggcagaaatcgatcccgac
cgttatacgtcgttgattgaaatgtttgagaatgctgtggcacgttatgctgatcaaagc
gcatttatcaatatgggcgaggtaatgactttccgtaaattggaagagcgtagccgtgcc
tttgctgcctatttacagaatggtctggggctgaaaaaaggggctcgcgtggcattgatg
atgccaaatttattgcaatatcccgtggcactgtttggcattctgcgtgcaggtatgatt
gtggtcaatgtgaatccgctctataccccgcgtgagttggaacaccagcttaatgatagt
gacacctctgctattgttatcgtttctaactttgcacataccttagaaaaaatagtcttc
aacacgccagttaagcacgttattttgacgcgcatgggtgaccaacttttccgtcctaaa
ggaaccctggttgatttcgtcgtgaaatacgttaaacggctcgtgcccaaataccactta
ccggatgctatttcgttccgtagtgcgatgcataaaggttaccgcatgcagtatgtcaaa
ccggatgtgcaaagtgaggatttggcttttctgcaatatacggggggaaccacgggggta
gcaaaaggtgcaatgctgactcaccgtaatatgctggcaaaccttgaacaagccaaagct
tgttattctccattattgaagccggggcaagaagtcgtggtaacggcattaccgttgtac
catatctttgctttgacgataaattgcttgttttttattgaaatgggcgggcaaaacctg
ttgattaccaacccgcgtgatatacacggcacggtcaaagaactcgcgcgttatcgtgtt
accgcgctatcaggtgttaacacactattcaatgcctggctgaataatgcagaatttcag
aaactggatttctcctcattacgtttatcggttggcggcggtatggctgtacagagagtg
gtggccgaaaaatggcaaaacttgaccggttgtcacctgttggaaggttatggattgaca
gaatgttcccctctggtttcagctaatccacataacttgactcattacagtggcagtatt
ggcttccccgttgcttcaacagaaattaaattagtagggaatgacggtaatgaagtttca
ccggacgaagtcggtgaaatgtgggtacgtgggccgcaggtaatgaaaggttactggaac
cgtcctgatgcgacggatgaggtgttgaaagatggctggttggcaaccggggatattgct
aacgtagatgaaaaaggcttttttcacattgttgatcggaaaaaagacatgattctggtt
tcagggtttaatgtctatccaaatgaagtagaagaagttgtttcttcccatcctaaagtg
ttagagtcggcagcagtaggcgttccgagtgaaaactcaggagaaactgtcaaagtattt
gttgtgcgtaaagatcccagcctgactgaagatgaacttaaaacgcattgccgtcattac
ctgacagggtataaggtgccaaaactcattgaattccgcaatgagttgccaaaatccaat
gtcggtaagattcttcgtaaagaactacgtaatgaagaattggtaaaagtggatgatgat
gctgctacacattga
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