Xenorhabdus doucetiae: XDD1_2212
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Entry
XDD1_2212 CDS
T03784
Symbol
rluB
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
xdo
Xenorhabdus doucetiae
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xdo03009
]
XDD1_2212 (rluB)
Enzymes [BR:
xdo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
XDD1_2212 (rluB)
Ribosome biogenesis [BR:
xdo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XDD1_2212 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CDG17911
UniProt:
A0A068QTD1
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All DBs
Position
complement(2268107..2269030)
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AA seq
307 aa
AA seq
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MSDKTEKLQKVLARSGHGSRREIEGYIQQGRISVDGKIATLGDRIEVKPSIKVRLDGRVL
NIKEPQKTVCRVLAYYKPEGELCTRHDPEGRPTVFDRLPKMQGARWVAVGRLDINTSGLL
LFTTDGELANRLMHPSQEVEREYAVRVFGEVDSAKLRQLTQGVQLEDGPASFKTIAFKGG
EGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIDLPKGLPRGGWTELGLEQT
NYLRQLVGLGEEMVTKVAVGRDQRRVKANQIRRAVKRHAQVASRPAGKRPASSSRQNAGK
KTTAKGR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataaaacagaaaagttacaaaaagttctcgcgcgttctggtcatggttcccgt
cgcgaaatcgaagggtatatccaacaaggacgtattagcgttgatggtaagatcgcaacg
ttgggtgatcgaatcgaagttaagccctcaattaaagttcgtttggatggacgagtctta
aatatcaaggaaccacagaaaacagtttgccgtgttttggcttattacaaaccggaaggt
gaattgtgtacccgccacgatcctgaaggtcgtccgacggtgtttgatcgtctgcccaaa
atgcaaggcgcacgctgggttgcggtagggcgtttggatatcaataccagcgggttatta
ctgtttacgaccgacggggaattggctaaccgtttgatgcacccaagccaggaagttgaa
cgtgagtatgcggttcgtgtgtttggtgaagtggatagtgcaaaacttcgtcaattaacg
caaggtgtacaactggaagatggtccggcttcatttaaaactatcgcgtttaaaggtggg
gaaggtatcaaccaatggtacaacgtcacgttgacagaaggtcgtaaccgcgaagtcaga
cggttatgggaagcggttggtgtgcaggttagccgtctgatccgggtgcgttatggcgat
attgatctgccgaaaggtctgccgcgtggtggctggactgagttggggttggaacagact
aactatttacgtcagttggtaggtttgggtgaagagatggtgaccaaggttgctgttgga
cgtgatcaacgtcgcgtcaaggctaaccagatccgtcgtgcagtaaaacgacatgcccag
gttgcatcccgcccggcggggaaacgccctgcaagtagttctcgtcagaatgccgggaag
aagacgacagctaaaggtcgttaa
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