Xenorhabdus doucetiae: XDD1_2284
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Entry
XDD1_2284 CDS
T03784
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo00250
Alanine, aspartate and glutamate metabolism
xdo00410
beta-Alanine metabolism
xdo00430
Taurine and hypotaurine metabolism
xdo00650
Butanoate metabolism
xdo01100
Metabolic pathways
xdo01110
Biosynthesis of secondary metabolites
xdo01120
Microbial metabolism in diverse environments
xdo02024
Quorum sensing
Module
xdo_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
XDD1_2284
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
XDD1_2284
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
XDD1_2284
00430 Taurine and hypotaurine metabolism
XDD1_2284
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XDD1_2284
Enzymes [BR:
xdo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
XDD1_2284
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
DUF5528
DUF6136
Motif
Other DBs
NCBI-ProteinID:
CDG17983
UniProt:
A0A068QSK3
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All DBs
Position
2382517..2384196
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AA seq
559 aa
AA seq
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MTCATQAKNDDEADKMALHTSCLDEQAWQALLDQFTPHPGEEGLLELETNIADDPVTYCR
RELGHPIGELTELEKVFVSVDIPEFPLNTDNYARYLSEDILNHVVPVSSPTFVGHMTSAL
PKHLPALGKVLTALNQNLVKLETSHILTALERQVLGMMHKLVYNRDEDFYQQWLHSGEHA
LATFCSGGTLANLTAMWACRNQLMPADGDFAGLAREGLARGLLHYGYRGLAILVSEQGHY
SLKKTVDVLGLGQDALVKVETDREGRICIDALLAQLQTLRQRNIKPMAIVGIAGSTETGA
IDPLNRLADIAEQAQCHFHVDAAWGGASLMSERYRHLFAGIERADTVTIDAHKQLYVPMG
SGMVLFRQPTLTNTIAQHANYIVRKGSKDLGRHTLEGSRSAMSLMLHSNLYLLGRRGLAR
LIEAGIEKARQFADLIHQQEDFELISEPQLCLLTYRYVPPKVLQALQESSAPVRQQLHEW
LNALNQDIQTAQWRAGKSFVSRTCLKPVQWDRQPTTVLRVVLANPLTTLEILENMLEEQR
QLARQSPFWQTLQAWAVIS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgacatgtgcaacccaagctaagaacgacgacgaggcggataaaatggctcttcacact
tcctgtctggatgagcaagcatggcaagcgctgctcgaccagtttactccccatcccggt
gaggaaggactgcttgaactggaaacaaacattgcagatgaccctgtcacttattgtcgc
cgtgagttaggccatcccataggcgaactgacagaacttgaaaaggtattcgtttcggtg
gatatcccggaatttccgcttaataccgataactatgcccggtatttgagtgaggatatc
cttaatcacgttgtgcccgtgtcatcccccacctttgtgggtcacatgacatcggcgctt
cccaaacatttacctgcactcggcaaggtattgacagcactgaatcaaaatctggtcaaa
ctggaaacctcgcatattttaaccgcgctggaacgccaagtgctgggtatgatgcacaag
ttagtttacaaccgtgacgaagatttctatcagcagtggttgcacagcggtgagcacgca
ctggctactttctgttctggcggaacgctggctaatttaaccgcgatgtgggcgtgtcga
aaccagctcatgcccgccgatggcgattttgccggtcttgcacgcgaggggttggccaga
ggattgctgcattatggctatcgtggtttagccattctggtctctgaacagggacactat
tcgctgaaaaaaaccgtggatgtgctcggattaggacaagatgccttggtaaaggttgag
actgacagagagggacggatctgcattgatgccttgcttgcacaattgcagacactgcgc
caacgcaatatcaagcctatggctatcgtcgggatagccggttccaccgaaaccggtgct
atcgatcccctgaacaggctggcggatatcgcggaacaggcgcagtgccatttccatgtt
gatgccgcctggggcggtgccagcttaatgtcagaacgctatcgacatttattcgccggc
atcgaacgtgccgatacggtaacgattgatgcccacaagcaactgtatgtgccaatggga
tcaggcatggtgctgttccgccagccaaccctgaccaacacaattgcccaacatgccaat
tatattgtacgcaaagggtcgaaggatctcggacgtcatactttggaaggctcacgcagc
gccatgtcgctgatgctgcacagcaacctctatctgcttggccgacgaggattagcccgc
ctgatagaggcaggcatcgaaaaagcccgccaatttgccgatctgatccatcaacaggag
gatttcgaattaatcagtgaaccgcagctttgcctgctgacgtatcggtatgtgccgcca
aaagtattacaggcgctacaggaaagttcggcgccagtcagacagcaactgcatgaatgg
cttaacgcgcttaatcaggatattcagactgcccagtggcgtgccggaaaatcctttgtt
tcgcgcacgtgtctcaaaccggtgcaatgggatcggcaacccaccaccgttctgcgggtc
gtgctggcaaacccactgaccacgttggaaatactggagaatatgcttgaagaacagcgt
caattagcacggcaaagtcccttctggcaaacgctacaggcttgggctgtgattagttga
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