Xenorhabdus doucetiae: XDD1_2410
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Entry
XDD1_2410 CDS
T03784
Symbol
dapE
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo00300
Lysine biosynthesis
xdo01100
Metabolic pathways
xdo01120
Microbial metabolism in diverse environments
xdo01230
Biosynthesis of amino acids
Module
xdo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XDD1_2410 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xdo01002
]
XDD1_2410 (dapE)
Enzymes [BR:
xdo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
XDD1_2410 (dapE)
Peptidases and inhibitors [BR:
xdo01002
]
Metallo peptidases
Family M20
XDD1_2410 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
CDG18109
UniProt:
A0A068QTI8
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All DBs
Position
2548376..2549509
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AA seq
377 aa
AA seq
DB search
MTMTCPVIDLAQQLIKRPSVSPDDQGCQELLIQRLQDIGFTVERMPFGDTLNFWAYRGTG
VTFALAGHTDVVPAGDISQWQTPPFEPAIRDGMLYGRGAADMKGSVAAMVVAAERFVAEH
PGHKGRLAFLITSDEEAKATNGTVKVVEALMSRHERLDYCLVGEPSSQTCLGDMIKNGRR
GSLTASLTIFGTQGHVAYPQLADNPIHRSVPFLQELVNTHWDNGNEFFPATRMQIANIQA
GTGSNNVIPGKLWVQFNFRFSTELTDSAIRRQVEDMLKKHHLNYEIDWWLSGQPFLTSKG
ELVDAVVESIEHYCGYQPELSTSGGTSDGRFIAKMGAQVVELGPINATIHKTDECVKVSD
LQALSLIYQRIMEQLLK
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgactatgacttgtccagtcattgaccttgctcaacagttaatcaagcgtccttctgtc
agcccggatgatcagggttgccaagaacttcttatccagcgcctgcaagacattggcttt
acagtagaacgaatgcctttcggcgacaccctgaacttttgggcttatcgtggaaccggc
gtgacttttgcccttgccggacacactgatgtcgttcctgccggcgatatctcacaatgg
caaacacccccttttgaaccggctatccgtgatggcatgttatatggtcgtggcgcggca
gatatgaaaggttcagtggcggcaatggtggttgctgctgaacgttttgtcgcagagcat
cctggacataaaggccgtctggcttttctgatcacctccgatgaagaggccaaagcgacc
aatggtactgttaaggtggttgaagcgttaatgtcgcgccatgaacgtttggattattgt
ctcgtgggtgaaccctccagccaaacgtgccttggggatatgatcaaaaacgggcgcagg
ggttcgctgacggcgagcttgacgatctttggcacccaagggcatgttgcctatccacaa
ttggcagataacccgattcatcgttcagtgccttttttgcaggaactcgtcaatactcat
tgggataacggcaatgaatttttcccggccacccgtatgcaaatcgccaatattcaggca
ggaaccggcagtaataatgttatccctgggaaattgtgggttcagttcaatttccgtttc
agcactgaactgactgatagcgcaatccgccggcaagttgaagatatgctgaaaaagcat
caccttaactatgagattgactggtggctatcaggccaaccttttctgaccagtaaaggg
gagctggttgatgcggtggttgagtctattgaacactattgtggatatcagccagagcta
tcaaccagcggcggtacatcagatgggcgttttattgccaaaatgggagctcaggtcgtg
gaattgggccccatcaatgccaccattcataaaaccgatgaatgtgtcaaggtgtctgat
ttacaagcattgagcctgatttatcaacgtatcatggagcaattactcaaatga
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