Xenorhabdus doucetiae: XDD1_2525
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Entry
XDD1_2525 CDS
T03784
Symbol
nfo
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XDD1_2525 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xdo03400
]
XDD1_2525 (nfo)
Enzymes [BR:
xdo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
XDD1_2525 (nfo)
DNA repair and recombination proteins [BR:
xdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
XDD1_2525 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
CDG18224
UniProt:
A0A068QU13
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All DBs
Position
2673220..2674062
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AA seq
280 aa
AA seq
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MKFVGAHVSASGGVDQAVIRAHELNATAFALFTKNQRQWHAPPLSAESIDKFKANCERYG
YGSRQILPHDSYLINLGHPEAEGLEKSRAAFLDEMQRCEQLGIGLLNFHPGSHLKKIDID
KCLARIAESINITLDKTQGVTAVIENTAGQGTNLGFKFEQLAAIIDGVEDKTRVGVCIDT
CHAFAAGYDLRTEKDCDETFNAFDKIVGFKYLKAMHLNDAKSEFSSRVDRHHSLGEGNIG
KLPFSYIMKDDRFNGIPLVLETINPDIWDQEIAWLKSQQN
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgttggagcccatgtgagtgcctcaggcggtgttgatcaggccgtgatccgc
gcccatgaattaaacgcaaccgccttcgccctgttcacgaaaaatcaacgccaatggcat
gccccgccgttatcggcagagagcatcgataaattcaaagcgaattgtgaacgttacggt
tatggtagccggcaaatcctgccccatgacagctacctcatcaatctgggtcatcctgaa
gcagagggtttggaaaaatcccgggcggcgtttcttgatgagatgcaacgttgtgagcag
ctcggcatcggtttactgaatttccatccgggcagccacctcaaaaaaattgacattgat
aaatgcctcgcccgtattgcggaatccattaatattacgttggacaaaacccaaggtgtc
actgccgtgatcgaaaacaccgccgggcaaggcaccaaccttggtttcaaattcgaacaa
ctggcagcaattattgatggcgtcgaagacaaaacgcgtgttggagtctgtattgatacc
tgccacgccttcgcagcaggttatgatttacggactgaaaaagattgcgatgagactttc
aacgcattcgataaaatcgttgggttcaagtaccttaaagccatgcacctgaacgatgcc
aagagcgaattttccagccgtgttgaccggcatcacagcctgggtgaaggcaatatcggt
aagctccctttcagctatatcatgaaagatgaccgtttcaatggcattcccttggtgctt
gaaacgatcaatcctgatatttgggatcaagaaattgcctggctaaaatcccaacaaaat
taa
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