Xenorhabdus doucetiae: XDD1_2559
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Entry
XDD1_2559 CDS
T03784
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
xdo
Xenorhabdus doucetiae
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xdo03032
]
XDD1_2559 (gyrA)
03400 DNA repair and recombination proteins [BR:
xdo03400
]
XDD1_2559 (gyrA)
Enzymes [BR:
xdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
XDD1_2559 (gyrA)
DNA replication proteins [BR:
xdo03032
]
Prokaryotic type
DNA Topoisomerases
XDD1_2559 (gyrA)
DNA repair and recombination proteins [BR:
xdo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XDD1_2559 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CDG18258
UniProt:
A0A068QTH2
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All DBs
Position
2704089..2706704
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AA seq
871 aa
AA seq
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MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDNAVYDTIVRLAQTFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKIAHELLADLEKETVDFVPNYDGTEQIPEVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLSEVIDGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIQEAYRTGRGKI
YIRARAEIETDEKNGRETIIVNEIPYQVNKARLIEKMAELVKDKRIEGISALRDESDKDG
MRIVIEVKRDAVAEVVLNNLYSLTQLQVSFGINMVALHQGQPKLLNLKDILSAFVCHRRE
VVTRRTIFELRKARDRAHILEALAVALVNIDPVIELIRRASTPAEAKTSLISQAWQLGNV
ASMLEQAGDDAARPEWLEPQYGIHDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYRE
LLKAIAELLFILESPERLMEVIREELLVIKEQYNDARRTELTENSADINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARTKEEDFIERLLVANTHDTILCFSNKGKLY
WMKVYQLPEASRGARGRPIVNLLPLDQSERITAILPVREYEDGLNIFMATASGIVKKTKL
SEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSAQGKVVRFLEEEEETLEDGTIR
VKGVRAMGRTATGVRGIKLSEGDKVVSLIIPRGEGEILTVTENGYGKRTAESEYPTKSRA
TQGVISIKVSERNGNVIGAIQVEPTDQIMMITNAGTLVRTRVSEVSVVGRNTQGVTLIRT
AENEKVVGLQRVAEPDDDEEEGETEYSQSED
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacattgccagagaaatcacaccggtcaatatcgaagaagagctgaaaagctcg
tatctggattatgcgatgtccgttattgttggacgcgcactgccggatgttcgggacgga
ctgaagccagtacaccgccgcgtgcttttcgcgatgaatgtattgggaaatgattggaat
aaaccttataagaaatctgcccgcgttgttggggatgttatcggtaaataccatccacat
ggtgacaacgctgtttatgacacgattgttcgtctggcacaaacattctccttgcgctat
atgctggttgacggtcaggggaactttgggtcagtagatggcgattctgcggcagcgatg
cgttacaccgaagtgcgcatggcaaaaattgcccatgaattgctggcagacttggaaaaa
gaaactgtcgactttgtgcccaactacgatggcacagagcaaatccctgaggtcatgcca
acccgtatccctaatctactggtgaatggttcatcagggattgcagtcggtatggcaacc
aacatcccaccccataacttatctgaggtgatcgacggctgcctggcctatattgatgat
gaaaacatcagtattgaaggcctgatggaacatatccccggcccggacttcccgacagcg
gctattatcaacgggcgccgtggcattcaggaagcctaccgcacaggtcgcggtaagatt
tacatccgcgcccgcgcagaaattgaaactgatgagaaaaatggccgcgaaaccattatc
gtcaatgaaatcccttatcaggtcaataaagcccgactgatcgaaaaaatggctgaactg
gtcaaagataagcgcattgaagggatcagtgcactgcgtgacgaatccgataaagatgga
atgcgcatcgttatcgaagtaaaacgtgatgccgttgctgaagttgtcctgaataacctg
tattcactgactcaattacaggtttcatttggcatcaacatggttgccctgcatcaggga
cagcctaagttactcaatctgaaagatattctttcagcgtttgtttgccaccgccgtgaa
gtcgttacccgccggacaatttttgaactgcgtaaagctcgcgaccgtgcccacatcctt
gaagcattagctgttgctctggtgaacatcgatccggttatcgaattgatccgccgtgct
tccacgcctgctgaagcgaaaaccagtttgatttctcaagcctggcagttaggcaatgtt
gcctctatgctggaacaagcgggtgacgatgctgcccgtcctgaatggctggagccacag
tacggtatccatgacggtaaatattacctgaccgaacagcaagcacaggctattttggat
ctgcgtctgcaaaaactaaccgggcttgagcatgaaaaactgcttgatgagtatcgtgag
ctgctgaaagctatcgctgaactcctgttcattttggaaagcccggaacgcttgatggaa
gtcattcgtgaagaactgctggttatcaaagagcagtataacgatgcccgccggactgaa
ctgactgagaattccgccgatatcaatattgaagacctgattaatcaggaagatgtggtg
gttacgctgtcccatcaggggtatgtcaaatatcagccactgtccgattatgaagctcag
cgtcgtggcggcaaaggcaaatcagccgcacgtaccaaagaagaagatttcattgagcgt
ttgctggtggccaatacccacgacaccatcctctgcttctcaaataaaggcaagctatac
tggatgaaagtatatcaattgccggaagcgagccgtggtgcccgcggtcgcccaattgtc
aaccttctgccattggatcagagcgaacgtattaccgccattttacctgtgcgtgaatat
gaagatgggctgaatatcttcatggcaaccgcaagcgggattgtgaaaaagactaaactc
agtgaattcagtcgtccacgcagtgccggtatcattgccgtgaacctgaatgaaggggat
gagttaatcggcgttgacctgactgatggcagcaatgaagttatgctgttctctgcacaa
ggtaaagtcgttcgtttcctcgaagaagaggaagaaacgctggaagatggcactattcgc
gtaaaaggtgtacgtgcaatgggccgcactgcaactggggttcgtggtatcaaactcagt
gaaggcgataaagtggtttccttgatcattcctcgcggggaaggagaaatcctgaccgtt
actgaaaatggttatggtaagcgtactgccgaaagcgaatatccgacaaaatcccgcgcg
acccaaggggttatttccatcaaagtcagcgaacgtaatggcaatgtgatcggcgccatt
caggtagaaccgactgaccaaatcatgatgattactaacgcaggaacattggtacgaacc
cgcgtttctgaggtcagtgttgttggccgtaatacgcaaggtgtcaccttgatccgcaca
gccgaaaacgaaaaagtggttggcttacagcgcgtagctgaaccagatgatgatgaagaa
gaaggtgaaacagaatatagtcagtcagaagattaa
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