Xenorhabdus doucetiae: XDD1_2570
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Entry
XDD1_2570 CDS
T03784
Symbol
menD
Name
(GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo00130
Ubiquinone and other terpenoid-quinone biosynthesis
xdo01100
Metabolic pathways
xdo01110
Biosynthesis of secondary metabolites
xdo01240
Biosynthesis of cofactors
Module
xdo_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
XDD1_2570 (menD)
Enzymes [BR:
xdo01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
XDD1_2570 (menD)
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Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
CDG18269
UniProt:
A0A068QU47
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Position
complement(2720028..2721701)
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AA seq
557 aa
AA seq
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MSNSALNRRWAELLLEALTRHGLRHICIAPGSRSTPLTLAAAENPKLICHTHFDERGLGY
LALGLAKAGKEPVAVIVTSGTAVANVYPALIEAGLTGERLVFLTADRPPELMDCGANQAI
RQTGIFASHPRQTLALPRPTTDIPASWLVSSIDNAMSNLKQGALHVNCPFAEPLYGNELT
AHQDWLHALGEWWQGDEPWLVQPEIPITSKALDWDIWQKKQGVVLAGRMRAEEGQSVAQW
AKTMGWPLMGDVLSQTGQPLPHADLWLNHARPQDILAQAQLVIQFGASLTSKRLLQWQAT
CQPEQYWIVDPIAGRLDPANHRGRKFTCPVADWLREHPACSQAPWAEELQAWSNSAFHCV
ETGLAGKFSEAAVAHQLHHLLPEQGQLFVGNSLIVRLVDALGQLPAGYPVYSNRGASGID
GLIATAAGVQRATDKPTLAIIGDISALYDLNSLALLRHPSHPMLLIVVNNNGGQIFSLLP
TPAEERQRFYCMPQHVNFDHAAAMFGLNYAAPQSWPELKQCVQRAWQRKQTTLIELNVAG
NEGAVCLQQLLKQVAAL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacagcgcacttaaccgccgttgggcggaacttttattggaagcattaacccgt
cacggattgcgtcatatctgtattgctcccggctctcgttcgacccccttgacattggct
gccgcagaaaacccgaagcttatctgtcatacccattttgatgaacgtggattgggctat
ttggcgttgggattggcaaaagcgggcaaagagcctgttgcggtgattgtgacgtcggga
accgccgttgccaatgtgtatcctgctttgattgaagcgggattaacgggagagcgattg
gtgtttctcaccgcagatcggccgcccgaattaatggattgtggtgcgaatcaagccatt
cgtcagaccggtatttttgcttcccatcccaggcaaactttagcgctgccccggccaacc
accgatattccggccagttggctggtttcctccatcgataatgcaatgtcaaacctgaaa
caaggtgccctgcatgttaattgcccgtttgcggaaccgttgtacggcaatgagttgaca
gcgcatcaagattggttgcacgcattgggcgagtggtggcaaggggatgaaccgtggctg
gttcagccagaaataccgatcaccagcaaggcgcttgactgggatatctggcagaaaaaa
cagggcgttgttctggcggggagaatgcgtgctgaagaggggcaatctgttgctcaatgg
gcaaaaacgatgggctggccgctgatgggtgatgtgctgtctcaaacggggcagcctttg
ccgcatgccgatctatggctgaatcacgcccgcccccaggatattttggcgcaagcgcaa
ttggtgatccaatttggtgccagcctgaccagcaagcggctgttgcaatggcaggccaca
tgccagcctgagcagtattggattgttgatcccattgccggccggcttgatccggcaaac
cacagaggccgtaaatttacttgccctgtagctgactggttacgggagcatcccgcctgt
tcacaagcgccttgggcagaggaattgcaggcatggtcaaacagcgcgtttcactgtgtt
gaaaccgggttggcaggaaaattcagcgaggcggcggttgcacatcaattgcatcactta
ttgccggagcaggggcagttgtttgtcggcaatagcttgattgtgcgtctggttgatgcc
ttggggcagcttccggcgggttatccggtttacagcaatcggggtgccagtggcatcgat
ggcttaatcgccactgccgccggtgtccagcgggccaccgataaaccgacgctggcaatt
atcggggatatttccgccctttatgatctgaacagtctagcgttattacgccatccttct
catcccatgttattgatcgtagtgaataataacggcgggcagattttttccttgctgccc
acgccggcggaagaacgccagcgtttttactgcatgccacaacatgtcaattttgatcat
gcggctgccatgttcggcctgaactatgcggcaccacaaagttggccggaattaaaacag
tgcgtccaacgggcatggcagcgtaaacagaccactttgattgagttaaatgtggcaggc
aatgaaggtgcggtctgcctgcaacaattactgaaacaggtggcggcgctgtga
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