Xenorhabdus doucetiae: XDD1_2573
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Entry
XDD1_2573 CDS
T03784
Symbol
ycdR
Name
(GenBank) lipoprotein (HmsF protein of hmsHFRS Operon)
KO
K11931
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
Organism
xdo
Xenorhabdus doucetiae
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GHL13
Polysacc_deac_1
DUF2334
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
CDG18272
UniProt:
A0A068QTF2
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Position
2726326..2728362
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AA seq
678 aa
AA seq
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MTHNLFRHWLMISTLLISLFIPPFGMMAHAAKPDFVPPAQRPLPMNERPWPKNGFVVLAY
HDVEDEGADQRFMSVRTSALNDQFAWLRENGYQPITVDQILTANQGGTPLPPKAVLLTFD
DGYSSFYHRVFPLLKAYNWPGILAPVGVWVDVPAEKPVDFGGLIVPRERFTTWEQVAEMS
RSGLVEIGSHTYQHHYGAIANPQGNTEPAAAIRIYDPKTGQYESEPAFRQRMEQDIATIT
QRIIAATGKQPRVWIWPYGIDNGVTLDIAKRYGYKMALTLDNGLANANNLDNVPRILLTH
NPSLKEFAEQVIQVQDKPILRIAHIDLDYVYDPDPVQQAENLDKLVQRIADLRVNTVFLQ
AFADPKGDGNVRELYFPNRWLPMRADLFNRVAWQLHSRLNIEVYAWMPVLAFELSPSLPR
VMSYDESHDKLFVNPTQYRRLSPYNPDNRRRIKEIYQDLASHAIFQGILYHDDAVMSDFE
DAGTDALKAYQAAGLPASVAEIRRDPEQFARWTRFKSQYLIDFTHELTQELKSIRGYQIK
TARNIFALPILEPDSEAWFAQNLDDFLAHYDWVAPMAMPLMENVPLAKSNAWLSRLVKII
AQRPEALDKTVFELQSVDWRKPLDKRAIPGHQLAEWMRQLQLNGAQSFGYYPDDFINNQP
EMNEIRPVLSPEWYPLND
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgacacataacctttttcgtcattggttgatgatctcgactctgctgattagcctgttt
attcccccgtttggcatgatggcccatgcagcaaaaccggattttgttccccccgcgcaa
cgtcccttgcccatgaacgagcgcccctggcctaaaaacgggtttgtggttctggcttac
catgatgttgaagatgaaggtgccgatcagcgttttatgtcagtccgtaccagcgccttg
aacgatcaatttgcctggctgcgggaaaatggctatcagccgattactgtcgaccaaatt
cttaccgccaatcagggcggaacgccattgcctcccaaggcggtactgctgactttcgat
gatggctacagcagtttttaccatcgcgtctttcccctgcttaaagcctataactggccg
ggcattctggcacccgtcggggtctgggttgatgtgcctgccgaaaaaccggtggatttt
ggtggcttgatcgtgccacgcgagcgctttacgacttgggaacaggtcgccgagatgtcc
cgatcgggtttagtggaaatcggctctcatacttatcagcaccattatggtgccatcgcc
aacccacaaggcaatacagagcctgccgctgccattcgcatttacgatccgaaaaccggt
caatatgaaagcgagccggcgtttcgccagcggatggaacaggacattgccacgattacc
caaagaattatcgccgccacaggtaaacaaccacgggtttggatctggccttatggcatc
gataacggggtgacgctggacatcgccaaacgctatggctacaagatggcgttgacgctg
gacaatgggctggcaaacgccaacaatcttgataatgttccgcgtatcttgctgactcat
aatccctccctgaaagagtttgctgaacaggtgattcaggtacaggacaaaccgatctta
cggattgcccatattgatctggactatgtttacgaccctgatccggttcaacaagccgag
aatcttgacaaactggtacaacgcattgctgatctgcgcgtcaataccgttttcctgcaa
gcctttgctgatcccaaaggcgatggcaatgtccgtgagctctacttccccaatcgctgg
ctgccgatgcgcgccgatctgtttaaccgcgtggcctggcaactgcacagtcgtttgaac
attgaagtttatgcgtggatgcccgttctggcatttgagctgtcgccttcacttccgcgg
gtaatgagctatgacgaaagtcacgacaaactgtttgtcaacccgacacaataccggcgt
ttatcgccttataacccggacaaccgccgaagaatcaaagagatttatcaggatttggcc
tcccatgccatttttcagggcatcctgtatcacgatgatgccgttatgtccgattttgaa
gatgccggcaccgatgccctcaaagcctatcaggccgctggtttaccggcctccgttgca
gaaattcggcgagatccggaacaattcgcccgttggactcgtttcaaaagccaatacctg
attgactttacccacgaattaacccaggaactcaaatcgatacggggttatcagatcaaa
acggcgcgcaatatttttgccctgccgatcctggaacccgacagcgaagcgtggtttgcc
cagaatctggatgattttctcgcccactacgattgggtcgcgcccatggccatgcccttg
atggaaaatgtgcccctggcaaaaagcaatgcgtggttatcccgattagtgaaaatcatt
gcccaacgcccagaagctctggataaaaccgtctttgaactccagtccgtagactggcgc
aagcctctggataagagagcgataccgggacatcaattagcagaatggatgcgtcaattg
cagctcaatggtgcgcagagtttcggttactaccccgatgactttatcaataatcaacca
gaaatgaatgagatccgccctgttctttctcctgaatggtatccacttaatgattga
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