Xenorhabdus doucetiae: XDD1_2821
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Entry
XDD1_2821 CDS
T03784
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XDD1_2821 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xdo03400
]
XDD1_2821 (ung)
Enzymes [BR:
xdo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
XDD1_2821 (ung)
DNA repair and recombination proteins [BR:
xdo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XDD1_2821 (ung)
Prokaryotic type
XDD1_2821 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CDG18520
UniProt:
A0A068QXE0
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All DBs
Position
3032960..3033640
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AA seq
226 aa
AA seq
DB search
MSAPLTWHDVIGNEKKQPYFVDTLAYVANERQAGKTIYPPQQDVFNAFRYTELPDVKVVI
LGQDPYHGPNQAHGLAFSVQPGIPAPPSLVNMYKELESDIAGFARPNHGCLLSWAKQGVL
LLNTVLTVERGNAHSHANLGWETFTDKVIAAINEHRSGVIFLLWGSHAQKKGRFIDTQRH
HVLKAPHPSPLSAHRGFLGCKHFSQANRLLEIQGLSPIDWNPQLSQ
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcacctcttacatggcacgatgtcatcggcaatgaaaagaaacagccttatttt
gttgatacattggcttatgtcgccaatgaacgtcaggctggaaaaaccatttatccgcct
cagcaagatgtcttcaacgcatttcgctataccgaattgcccgatgtaaaagtggtgatt
ttggggcaagacccttaccacgggccaaatcaagcccacggtctggctttctctgtacag
ccgggtattcctgctccaccttctctcgttaatatgtacaaggaactggaatcggatatt
gctggatttgcccgccccaatcacggttgtttgctcagttgggcaaaacagggggtatta
ttactcaataccgtgctgaccgttgaacgtggcaacgcacattcccatgcgaatttgggg
tgggaaacatttactgacaaagtgattgcagccatcaatgaacatcgcagcggggttatt
ttcctgctttggggatctcatgcccagaaaaaaggccgttttattgatactcaacgccat
catgtattaaaagcgccgcatccttcacctttatctgcccaccgtggttttttaggctgt
aaacatttttcacaggccaacagattgctggaaatccaaggattgtcgccaatagattgg
aatcctcaattgtcccaataa
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