Xenorhabdus doucetiae: XDD1_2881
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Entry
XDD1_2881 CDS
T03784
Symbol
prpR
Name
(GenBank) Propionate catabolism operon regulatory protein
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
xdo
Xenorhabdus doucetiae
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xdo03000
]
XDD1_2881 (prpR)
Transcription factors [BR:
xdo03000
]
Prokaryotic type
Helix-turn-helix
Other families
XDD1_2881 (prpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA
AAA_5
HTH_psq
HTH_23
AAA_2
RWP-RK
Xre-like-HTH
HTH_11
AAA_16
HTH_50
HTH_Tnp_ISL3
HTH_30
HTH_17
NACHT
HTH_1
HTH_10
HTH_24
Motif
Other DBs
NCBI-ProteinID:
CDG18580
UniProt:
A0A068QXK1
LinkDB
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Position
complement(3076872..3078554)
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AA seq
560 aa
AA seq
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MASVHAGENNRPVIWTVSVSRLFDLFRDITPEFDHQADITPIQLGFERAVQHLRKRLETE
HCDAVICAGSNGAYLKSRLSVPVIIAKASGFDVMQALARARQISSRIGVITYQDTLPALE
EFQQRFNLRIEQRSYVTEEDARAQVNALKAAGIKVIVGAGLITDLAYEAELVGIFVYSAD
SIRQAFQDALEIARMTKLNQAAISPYPTEDKLRTRHTISDIRGNSTAIEHVRDTIMLYSR
STATVLIQGESGTGKELVAQAIHHEYALRYGQLAGKHPRPFVAVNCGAITESLLEAELFG
YEEGAFTGSRRGGRAGLFEIAHRGTLFLDEIGEMPLPLQTRLLRVLEEKSVVRVGGYRPI
AVDVRIICATHCDLDTWVREGRFRADLFYRLSVLRINVPALRARENDIGLLAIEYLQRAF
AALNLPVSASRIAELAKCHEVLHAYHWPGNVRELRNLMERTALYLSAHPEQVLTPALVLS
LSPERHIDTHVISNDMKTAQIEISSLIKNPSSMKNISIHDVVARFSGDRRAAAEYLGISR
TTLWRRLKREQDKMKTISED
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtacacgcaggagaaaataataggccggtgatctggacggtttctgtttcc
cggctttttgacctttttcgtgatattaccccggaatttgatcatcaggcggatatcacg
ccgattcaattgggttttgagcgcgcagttcaacatcttcgcaaacggctggaaactgaa
cactgtgacgctgtgatttgcgcgggatcgaatggtgcttatttaaaaagccgtttgtcc
gtacccgtcattattgccaaagccagcggatttgatgttatgcaggcactggcgcgcgcc
cgacaaatcagttcccgcatcggtgtgatcacttatcaggataccttgccggcattagaa
gaatttcagcagcgtttcaatttacgcattgaacaacgtagttatgttacggaggaagat
gccagggcacaggttaatgcgttgaaggcggcaggcattaaggtgattgtgggcgcagga
ttaattaccgatctggcttatgaagctgaactggtgggaatttttgtctattcggcagac
tccattcgacaagcatttcaagatgccttagagatagcgcgcatgaccaaactcaatcag
gcggcgatttcgccttatccgacagaagataagctacgcacacggcacacaatcagcgat
atcaggggaaattccactgcgatagagcatgtccgcgatacgattatgctgtattcccgt
tcgaccgccacggttttgattcagggagaaagcggtacaggaaaagagttggtggcacag
gcgattcatcatgaatatgccttgcgttacgggcagttggcgggtaagcatccacggccg
tttgttgccgttaactgtggtgcgattaccgagtctttgctggaggctgaactgtttggc
tatgaggaaggcgcttttacgggttcaaggcgtggcgggcgtgcagggttatttgaaatt
gcgcacagggggacattatttctggatgaaattggtgaaatgccgttaccgttacaaaca
cggttattaagggtattggaagaaaaatccgtggtcagggttggcggatatcgtccgatt
gctgtcgatgttcggatcatctgtgccacgcattgtgatttggatacttgggtcagggaa
gggcgttttcgggccgatttgttctaccgtttgagtgtattacgcatcaatgtaccggca
ttaagggcgagggaaaatgatattggcttgttggcaatagagtacttacaacgggctttt
gcggcacttaacttacccgtttctgcatcgcgaatagcggaactggctaagtgtcatgag
gtattgcacgcctaccattggccgggaaatgtgcgtgaactgcgtaacttgatggaacgg
acagcgctttatttgagcgctcatcctgaacaggtgctgacgccggcattggtattatct
ctctcacctgagcgtcatattgatacgcatgttatcagcaacgatatgaaaaccgcccag
attgaaatatcttctttgattaaaaacccttcttcaatgaagaatatttcaatacacgac
gttgtcgcgcgattttcaggtgatcgacgtgcggccgcagaatatctgggaattagccgc
acgacgttatggcggaggttaaagcgggaacaggacaaaatgaaaaccatttcagaggat
taa
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