Xenorhabdus doucetiae: XDD1_2972
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Entry
XDD1_2972 CDS
T03784
Symbol
gcvP
Name
(GenBank) Glycine dehydrogenase [decarboxylating]
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo00260
Glycine, serine and threonine metabolism
xdo00630
Glyoxylate and dicarboxylate metabolism
xdo00670
One carbon pool by folate
xdo00785
Lipoic acid metabolism
xdo01100
Metabolic pathways
xdo01110
Biosynthesis of secondary metabolites
xdo01200
Carbon metabolism
Module
xdo_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
XDD1_2972 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XDD1_2972 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
XDD1_2972 (gcvP)
00670 One carbon pool by folate
XDD1_2972 (gcvP)
Enzymes [BR:
xdo01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
XDD1_2972 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
CDG18671
UniProt:
A0A068QVK2
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All DBs
Position
complement(3164039..3166915)
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AA seq
958 aa
AA seq
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MTQTLIQLENQGEFIRRHIGSSAEQQTEMLAIVGTHSLDELTNNIVPRDIALPEPPAVGE
GATEQQALAELKAMASQNQRYQSYIGMGYSPAILPPVILRNLLENPGWYTAYTPYQPEVS
QGRLEALLNFQQVTIDLTGLELASASLLDEATAAAEAMAMAKRISKLKGAERFFVADDIH
PQTLDVVRTRAETFGFDVIVDKAEKVLELEGIFGVLLQQVGTTGEVHDYRDLIATLKARK
IIVSVAADFMALVILTAPGQQGADIVFGSAQRFGVPMGYGGPHAAFFACRDEFKRSMPGR
IIGVSRDAAGNRALRMAMQTREQHIRREKANSNICTSQVLLANIAGMYAVYHGSKGLQRI
ANRIHRLTDILAAGLQQAGITLRHKTWFDTLAVEVPDKAQVLARAAKAQINLRTDILGAV
GVSLSEKTSRDDVITLFQVITGSDAILDIDTLDREAAAGSQSIPAAMLRNDDILTHENFR
RYHSETDMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEIMPITWPEFTDMHPFCPPE
QAQGYHQLIGQFSHWLVLLTGYDAVCMQPNSGAQGEYAGLLAIRRYYASRGEQHRHVCLI
PSSAHGTNPASAHMAGMTVVVVSCDKEGNIDLADLREKAEKHRDDLACIMVTYPSTHGVY
EETIREICEVIHQHGGQVYLDGANMNAQVGITTPGFIGADVSHLNLHKTFCIPHGGGGPG
MGPIGVKKHLAPFVPGHSVVEMDGVTTLGAVSAAPFGSASILPISWMYIRMMGAKGLKQA
SQVAILNANYIAARLKGAYEILYTGRDGYVAHECILDIRPLKDEFGISEMDIAKRLIDYG
FHAPTMSFPVAGTLMVEPTESESKIEIDRFIDAMLAIREEIRQVASGEWPLEDNPLVNAP
HVQAELISDWNHAYSREIAVFPTAETKANKYWPAVKRLDDVYGDRNLHCSCAPIEDYR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgactcagacactcatccaacttgaaaatcaaggtgaattcattcgtcgtcacattggt
tcttctgctgaacagcaaaccgagatgctggcgatagtcggtacacattctcttgatgag
ctgaccaataacatcgttccccgtgatatcgcattaccagaacctccggcggtcggtgaa
ggcgcaacggaacaacaggcattggccgaattgaaagcaatggcgagccagaaccagcgc
tatcaatcgtatattgggatggggtattcacctgcaatccttccccccgttattttgcgt
aatttgctggaaaatcccggctggtatacggcatataccccttatcaaccggaagtttcc
caaggccggttagaggcgttactgaacttccagcaagtcaccattgacctgacgggatta
gaactggcttctgcttccctgctggatgaagcaacagccgccgcagaagcgatggcaatg
gcaaaacggattagcaaactgaaaggggctgaacgtttctttgtggccgatgatattcat
ccacagaccttggatgtggtgcgtacccgcgccgaaacctttggatttgacgtcattgtt
gataaagcagaaaaagtactggaactggaaggtatctttggtgtcctgctgcaacaagtc
ggcaccacaggggaagttcacgactaccgcgatctgattgcaacactgaaagcgcgtaag
atcattgtcagtgttgccgcggatttcatggctctggtcatcctgaccgcgccgggtcaa
caaggtgctgacattgtattcggttccgcccagcgtttcggtgtgccgatgggatatggt
ggccctcatgcggctttctttgcgtgccgcgatgaattcaaacgttccatgccgggacgt
attatcggcgtttcccgtgatgcagcgggtaacagggcattgcgcatggcgatgcaaacc
cgtgagcaacatattcgccgtgaaaaagcgaactccaatatctgtacttcccaagtcttg
ctggcgaatatcgcaggtatgtacgccgtttatcatggctcaaaaggcttgcagcgcatt
gccaaccgtatccaccggctgaccgatattctggccgccggcttgcaacaagcgggtatc
acgctgcgtcataaaacttggtttgatacgctggccgttgaagtgccagataaagcgcag
gtactggcaagggcggcgaaagcgcaaattaacctgcgtaccgatattcttggtgcggtt
ggcgtctccttgagcgaaaagaccagccgggatgatgtgatcacgctgttccaggtgatc
acgggttctgatgcaatactggatattgatacgctggatcgtgaagccgcggccggcagc
cagtctattccagccgctatgctgcgtaatgacgatattttgacccatgaaaatttccgc
cgttaccacagcgaaaccgacatgatgcgctatatgcacagtctggagcgtaaagatctg
gcattaaaccaagctatgatcccgctgggctcatgcaccatgaaactaaacgcagcggcg
gaaatcatgccgattacctggcctgaatttaccgatatgcaccctttctgcccgccggaa
caagcgcagggttatcaccaactgatcggccagttttcccattggctggtgctgttgaca
ggctatgatgcagtgtgtatgcagccgaactccggcgcacaaggagaatatgcggggctg
ttggctattcgtcgctactatgccagccgcggcgagcaacatcgccatgtttgcctgatc
ccaagttctgcccacggcaccaatccggcttctgcgcatatggcggggatgaccgtcgtt
gtcgtcagttgcgacaaagaaggcaacatcgatctggccgatttgcgtgaaaaagcggaa
aaacaccgtgacgatctggcttgcatcatggtgacttacccctccactcacggtgtgtat
gaagaaaccatccgtgaaatttgtgaagtgattcaccaacatggtggtcaggtttacctt
gatggcgctaacatgaacgctcaagtggggattaccacgccgggctttattggtgccgat
gtctcgcacctgaacctgcacaaaaccttctgtattccacatggcggcggtggccccggc
atggggccgattggcgtgaaaaaacaccttgccccctttgtgcccggccattccgtagtt
gaaatggatggcgtcacgacattaggtgccgtatccgccgcgccattcggcagtgcctcc
attttgccgattagctggatgtatatccgcatgatgggagcaaaagggctgaaacaagcc
agtcaggtggcgatcctgaacgcaaactacattgccgcccgcctgaaaggggcgtatgag
atcctctataccgggcgtgatggatatgtggcccacgaatgtattctggatattcgccca
ttgaaagacgagttcggcatcagtgagatggatatcgccaagcgtctgattgactacggt
ttccacgcaccaaccatgtctttcccggttgcgggtaccttgatggttgagccaacggaa
tcagaaagcaaaattgaaatcgatcgctttattgacgccatgctggcgattcgggaagag
atccgccaagtcgccagcggagaatggcctttggaagataacccactggttaatgcgcca
cacgttcaggctgaattaatttctgactggaaccacgcatacagccgtgaaattgccgtt
ttcccgacggcggaaaccaaagccaataaatactggccggcggttaaacgccttgatgat
gtttacggtgaccgcaatttgcattgttcttgtgcaccgattgaagattatcgttaa
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