Xenorhabdus doucetiae: XDD1_3039
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Entry
XDD1_3039 CDS
T03784
Symbol
metC
Name
(GenBank) Cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo00260
Glycine, serine and threonine metabolism
xdo00270
Cysteine and methionine metabolism
xdo00450
Selenocompound metabolism
xdo00670
One carbon pool by folate
xdo01100
Metabolic pathways
xdo01110
Biosynthesis of secondary metabolites
xdo01230
Biosynthesis of amino acids
Module
xdo_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XDD1_3039 (metC)
00270 Cysteine and methionine metabolism
XDD1_3039 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
XDD1_3039 (metC)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
XDD1_3039 (metC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xdo04147
]
XDD1_3039 (metC)
Enzymes [BR:
xdo01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
XDD1_3039 (metC)
Exosome [BR:
xdo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
XDD1_3039 (metC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CDG18738
UniProt:
A0A068QUX1
LinkDB
All DBs
Position
complement(3237662..3238828)
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AA seq
388 aa
AA seq
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MAEFNKIKFDTQSVHAGYVPDHTGAVMPAIYATSTYAQPAPGQHTGYEYSRSGNPTRDAL
ERAIAELENGTRGYAFGSGLAASSTILELLDKDSHIIAVDDLYGGTYRLLEKVRRRTAGL
KVTYVEAGDTAALEAAIQPDTKMIWVETPTNPLLKLADLTAIAQLARQHNIISVADNTFA
SPYIQRPLDLGFDIVVHSATKYLNGHSDAIAGLAVVGDNAELAEQIAFLQNSIGGILDPF
SSFLVLRGIRTLALRMERHIDNAEKIAHWLEQQPQVDKVYYPGLTAHPQHELAKRQMRGF
GGMISIVLKGDEDYARRVIKELQLFTLAESLGGVESLIGQPFTMTHASIPLEKRLAAGIT
PQLLRISVGIENADDLIADLSQAFERAK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccgagtttaataagattaaatttgatacacaaagcgtccatgcaggatatgtacct
gatcacacgggggcagtcatgcctgcaatttatgcgacatcgacttatgctcaacctgca
ccgggtcaacatacgggatatgagtactcccgtagtgggaacccgacacgggatgcttta
gagcgtgcaattgctgaattggagaatggcactcggggttatgcttttggttctggtctg
gccgccagttcgaccattttggaattacttgataaagacagtcatatcattgcggtagat
gatctctatgggggtacttatcggttgctggagaaagtgcgccgccggacggcgggcctg
aaagtcacctatgttgaggcaggggatactgcggcactggaagcggcaattcagcctgac
acaaaaatgatttgggtggaaacgcccacaaacccactgctgaaattggcggatttaacg
gcgattgcacagcttgccaggcagcataatattatcagtgtggccgataacacgtttgct
tctccttatattcagcgtccactggatttaggttttgatattgtcgtgcactctgcgacc
aagtatctgaatgggcattctgatgctattgcgggtcttgcggtggtgggagataacgcc
gagttggcggagcaaattgcgttcctgcaaaattccattggtggcattcttgatccgttc
agtagttttcttgtcctgcgtggcattcggacattggcactgcgtatggagcgccatatt
gataacgcggagaagatagcccattggcttgaacagcagccacaagtcgataaagtgtac
tatcctggcctgactgctcatcctcagcatgaattggcaaaacgtcagatgcggggtttt
ggtggcatgatctctatcgtgctgaaaggcgacgaagattatgcgcggcgcgtcattaaa
gaactgcaattgtttaccttagcggaaagtttaggcggtgtggaaagtttgattggtcag
ccgtttaccatgacccatgcttccattccgctggaaaagcgcttggccgccggcattacg
ccacaattgctccgtatttccgtggggatcgagaatgcggatgatctaatagcagattta
tctcaagcatttgaacgtgctaaataa
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