Xenorhabdus doucetiae: XDD1_3110
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Entry
XDD1_3110 CDS
T03784
Symbol
mrcB
Name
(GenBank) Penicillin-binding protein 1B [Includes: Penicillin-insensitive transglycosylase; Penicillin-sensitive transpeptidase]
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo00550
Peptidoglycan biosynthesis
xdo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XDD1_3110 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xdo01003
]
XDD1_3110 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xdo01011
]
XDD1_3110 (mrcB)
Enzymes [BR:
xdo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
XDD1_3110 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
XDD1_3110 (mrcB)
Glycosyltransferases [BR:
xdo01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
XDD1_3110 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
xdo01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
XDD1_3110 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
PBP1b_C
UvrB_inter
PBP1_TM
ETFQO_UQ-bd
Motif
Other DBs
NCBI-ProteinID:
CDG18809
UniProt:
A0A068QVL6
LinkDB
All DBs
Position
3300299..3302629
Genome browser
AA seq
776 aa
AA seq
DB search
MTKKGKNVRRSQPRPPKRGGRWFLWLLLKIFIVLAVLTVIYGFYLDNKIRQRIDGKVWDL
PAAVYGRVVNLEPGMNYSKDEMVQLLEGMQYRKVAKITREGEFMVKGNSIEMLRRPFDFP
DGQEGQIQARLTFQNNHLASIENIDNQRQFGFFRLDPKLITMMQSANGEQRLFVPRKGFP
DSLVRTLLETEDRYFYEHGGVRPLSIARAALANLMAGRAVQGGSTLTQQLARNLFLSNER
TLSRKANEALMAILLDARYSKDRVLELYLNEVFLGQSGDEQIHGFPLASQYYFGSPISEL
TLDQQALLVGMVKGASVYNPWRHPQKALERRNIVLKILQSRNIITQKEYDTLSARSLGVK
PKSESLTPQPAFMQLVRQELQEKLGDKVNDLSGVKIFTTLDPVAQDAAEESVEKGVAALR
KARKVADLEGAMVVVDRFSGEIRAMVGGSQPQYAGFNRALNARRLIGSLAKPATYLTALS
QPDKYRLNTWLSDEPISIPQSGGKPWEPRNFSRTFSGRVMVIDALARSMNVPTVNLGLDV
GLDRIASTLVSLGIPAKEIQQIPAMLLGAISLTPMEMAQEFQTIASGGNRAKLSALRSII
AEDGTVIYQSYPQAERAVPPQAAYLTLYGMQQVIARGTGRSLAGKYGQYNLAGKTGTTND
LRDSWFTGIDGKEVVVVWTGRDNYGPTNLTGATGALTIYRRYLENETPLALNNRPPEGIV
DMSVNEDGSFNCEGGGIRVLPVWTDDPQGLCQQSVQQPIEENAEEAPGWLREMFGQ
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaaagggaagaacgtccgccgttctcagccccgtccgcctaaaagagggggg
cgctggtttttatggttgctgctaaaaatctttattgtgctggcggtgctcacagtgatt
tatggcttctatctggataacaaaattcgccagcgtattgacgggaaagtctgggattta
ccggcagccgtgtacggacgggtagtcaatcttgaacccggtatgaattacagcaaggat
gaaatggttcaattgctggaaggcatgcagtatcggaaagtggcaaaaatcacccgtgaa
ggggaattcatggtcaaagggaatagcattgagatgctgcgtcgcccatttgatttcccg
gatggtcaggaaggacaaattcaagcccgcctgacctttcagaacaatcaccttgccagc
atcgaaaatatagacaatcagcggcagtttggtttcttccgccttgatcccaaactgatt
acgatgatgcagtcggcgaatggcgaacagcgtctgtttgttccgcgtaaaggcttccct
gattcactggtcaggacgttgctggaaacagaagatcgttatttctatgaacatggcggg
gtcaggccgctttccattgcccgcgcggcattggctaatctgatggcggggcgtgccgtt
caggggggcagcaccctgacacagcaattggcgagaaacctgttcctctcaaatgaacgc
accctgagccgtaaagcgaatgaagcgctgatggcaatcctgttagatgcacgttacagc
aaagatcgtgtgcttgaattgtacttgaacgaagtttttctggggcagagtggtgatgag
cagatccacggtttcccgctggcgagtcagtactactttggcagcccgattagtgaatta
accttggatcagcaggctttgttggtgggcatggtgaaaggcgcatcggtgtataacccg
tggcgtcatccccaaaaggcgctggaacgccgcaatattgttctgaaaattctccagagc
cgaaacattatcacgcaaaaagagtatgacacgctgagtgcccgttcactgggtgtcaaa
ccgaaaagtgaaagtctgacaccgcaacccgcttttatgcagctcgtgcggcaggaattg
caggaaaagttaggcgataaggttaatgacttatcgggggtaaaaatcttcacgacgtta
gatccggttgcacaggatgcggcagaagagtcggttgaaaagggcgtggctgccctgcga
aaagcccgcaaggttgctgacttggaaggggcaatggtggtggttgaccgtttcagcggt
gaaattcgtgcgatggttggcggctcccaaccacagtatgccggatttaaccgtgcattg
aatgcccgccgtttgattggttcgctggcaaaaccagccacttatctgacggcattgagt
caaccggataaatatcgcctgaatacctggctgtcggatgaacctatttctattcctcag
tcgggtggaaagccttgggaaccgaggaactttagccgcactttcagtgggcgagtaatg
gtgatcgatgcgttagcgcgttcaatgaatgtcccgaccgtgaatttggggctggatgtt
gggttagatcgcattgccagtaccttagtttcactggggattccggcaaaagagatccag
caaatcccggccatgttgttgggcgcgattagcctgacgccaatggaaatggcgcaagag
ttccagacgattgccagtggcggtaatcgggcaaaactttctgcgttacgctccatcatt
gcagaagacggtacggtgatttaccagagctatccacaggcagaacgggctgttcctccc
caagctgcttatctgacactgtacggtatgcagcaagtgattgcccgcggtacaggccga
tcactggctggaaaatatggtcaatataatctggccggtaagaccggcacgacgaacgat
cttcgtgacagttggtttacgggaattgatggtaaggaagttgtggttgtctggacgggg
cgtgataactatggcccgaccaatttgaccggcgcgacgggggcactgacgatttaccgc
cgttatctggaaaacgaaacgccactggcactgaataaccgcccaccggaaggtattgtg
gatatgtccgtcaatgaagacggcagtttcaactgcgagggcggcggtatcagagtcttg
ccggtttggacggatgatccacagggattgtgccagcaatcggtacaacagccgatagag
gagaatgcagaagaagcccccggctggctgcgtgagatgtttggtcagtga
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