Xenorhabdus doucetiae: XDD1_3188
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Entry
XDD1_3188 CDS
T03784
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase; 3-hydroxyacyl-CoA dehydrogenase]
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo00071
Fatty acid degradation
xdo00280
Valine, leucine and isoleucine degradation
xdo00310
Lysine degradation
xdo00362
Benzoate degradation
xdo00380
Tryptophan metabolism
xdo00410
beta-Alanine metabolism
xdo00640
Propanoate metabolism
xdo00650
Butanoate metabolism
xdo00907
Pinene, camphor and geraniol degradation
xdo00930
Caprolactam degradation
xdo01100
Metabolic pathways
xdo01110
Biosynthesis of secondary metabolites
xdo01120
Microbial metabolism in diverse environments
xdo01200
Carbon metabolism
xdo01212
Fatty acid metabolism
Module
xdo_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
XDD1_3188 (fadB)
00650 Butanoate metabolism
XDD1_3188 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
XDD1_3188 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
XDD1_3188 (fadB)
00310 Lysine degradation
XDD1_3188 (fadB)
00380 Tryptophan metabolism
XDD1_3188 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
XDD1_3188 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
XDD1_3188 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
XDD1_3188 (fadB)
00930 Caprolactam degradation
XDD1_3188 (fadB)
Enzymes [BR:
xdo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
XDD1_3188 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
XDD1_3188 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
XDD1_3188 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
XDD1_3188 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
Motif
Other DBs
NCBI-ProteinID:
CDG18882
UniProt:
A0A068QV47
LinkDB
All DBs
Position
3381834..3384020
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AA seq
728 aa
AA seq
DB search
MLYLSETIQVKWLKDGIAELIFNAPAAINKLDTKTVTSLDQAVAALEQAIELKGLLIRSE
KPAFIVGADITEFLSLFNAPAEKLHELLDLANNIFNRIEDLPVPTLSAINGYALGGGCEL
VLSTDFRVASPDLRIGLPETKLGIMPGFGGSVRLPRLIGTDNALEIISAGKDIGAEEALK
NGLVDAVVSAEKLRDSAVSVLEQAIRGDLDWKAARQPKLMPLNLNEIERTMSFTVAKGLV
MKVAGSHYPAPITAVKTIEKAAILGRDEALKLESASFVSLAHTPVAHALVGIFLNDQYVK
GLAKKHLQAVTTPEHAAVLGAGIMGGGIAYQSARKGIPVLMKDINQKALDLGVNEAAKLL
NKQFERGRLDAMKMAKILASIQPTLNYAGIEQSQIVVEAVVENPKIKTAVLAEAESYISD
DCILASNTSTIPITELAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEKTSDKTISSVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLLRDGGDFRQIDKIMEKEFGWPMGPAYL
IDVVGIDTAHHAQAVMAQGFPDRMSRDYRDAIDVLFENQRYGQKNGVGFYQYVQDKKGKP
KKAQDETTDQLLASISKPKQAFSGEEIIARTMIPMINEVVRCLEEGVIASPAEADMALVY
GLGFPPFHGGVFRYLDTMGTAAYVKLAESYAHLGALYHVPAGLKAKSESNESYYPAPAEL
AVNPGEKA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgctctacctaagtgaaactattcaagtaaaatggctgaaagatggcattgctgaactg
atcttcaatgcaccggctgcaattaataaattagatacaaaaacggtgacgtcactggat
caggccgttgccgcccttgagcaagcaattgaactaaaagggttgctgatacgttctgaa
aaacccgcgtttattgtcggcgcagacatcacagaatttttatcgctatttaatgcaccc
gcagaaaaactgcacgaattactggatctcgccaacaatatttttaaccgcatagaagat
ctccctgttccaactctctccgctatcaatggctatgcccttggcgggggatgtgaatta
gtcctttcaactgattttcgtgtcgcctccccggatctgcgtatcggattgcccgaaaca
aaactgggcatcatgccggggttcgggggttctgtccgtctgccgcgcttgattggtacg
gataatgctctcgaaatcatttccgccggaaaagatattggcgctgaagaagcgttgaaa
aatggtctggttgatgccgtcgtttctgccgaaaaattacgtgattctgcggtttcagtg
ttggaacaagccattcgaggagatttagattggaaagcggctcgccagcctaaactgatg
ccactgaatctcaatgagatcgaacgtaccatgagtttcaccgtagcaaaagggttggtc
atgaaagtggccggttctcattatccggcacccatcactgcggtaaaaaccattgaaaaa
gcggcgatactgggtcgcgatgaagccctgaaactggaatccgccagttttgtatcattg
gcacacacccctgtcgcccatgctttagtcggtatcttcctgaatgaccaatatgttaag
gggttggcgaaaaaacacctgcaagccgtcacgacacctgaacatgcggcggtattgggt
gcgggaattatgggaggagggattgcctatcaatcagcgcgcaagggcattcctgttctg
atgaaagacatcaatcaaaaagcgctggatttaggtgtcaatgaagcggccaagttgctg
aataaacaatttgagcgtgggcgcttagatgccatgaagatggccaagattctggcatct
attcaacccaccctgaattatgccggtattgagcaatcccagattgtggttgaagctgtg
gttgagaatcctaaaatcaaaacagccgttctggcagaagcagaatcctatatcagcgat
gactgtattttagcttcgaatacctccaccatcccaatcactgaattagcaaaatcactc
aaacgcccggaaaacttctgtggcatgcatttctttaacccagtgcatcgtatgccgttg
gtcgaaatcatccgtggagaaaaaacctcagataagacaatttccagcgttgtcgcctat
gccagtaaaatgggtaaaacccccatcgtggttaacgactgccctggcttctttgtcaac
cgcgtattgttcccttatctggcgggttttggcatgttgctgcgtgatggcggtgatttc
cgccaaatcgacaaaatcatggaaaaagagtttggctggccaatgggtcccgcttatctg
attgatgttgtcggcattgacaccgctcaccatgcacaggcggttatggcccaaggtttc
cccgaccgcatgagtcgcgattatcgggatgccattgatgtattatttgaaaatcagcgt
tatggtcagaagaatggcgtcggtttttatcaatatgtccaggataaaaaaggcaaaccg
aaaaaagcgcaggatgaaacgaccgatcagttactggccagcatcagcaagccgaaacag
gctttctctggcgaagagatcattgcccgaaccatgatcccgatgattaacgaagttgtt
cgttgtttggaagaaggtgtcattgccagcccggcagaagcggatatggctctggtatat
ggcttgggcttcccgccattccacggtggtgttttccgttacttggatactatgggaacc
gcagcctacgtgaagctggcagaaagttatgcgcacttgggcgcgctctatcacgtacct
gcgggcctgaaagcaaaatccgaaagcaatgaaagttactaccctgcaccggcagaactt
gctgttaatccaggtgaaaaagcgtga
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