Xenorhabdus doucetiae: XDD1_3382
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Entry
XDD1_3382 CDS
T03784
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein rapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
xdo
Xenorhabdus doucetiae
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xdo03021
]
XDD1_3382 (rapA)
Transcription machinery [BR:
xdo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
XDD1_3382 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CDG19072
UniProt:
A0A068QVN3
LinkDB
All DBs
Position
3583755..3586664
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AA seq
969 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPASGENRLYARNDSPITRVMFNVDDT
VTSHEGWKLKINDVQLDNGLLTYVGTRLDTEEENICLREVFLDSKLTFNKPQDRLFAGQI
DRMDRFALRFRARKHLSEQSRLAESGLRGIRASLIPHQLHIANEVGKRHAPRVLLADEVG
LGKTIEAGMIIHQQLMAGRAERVLVIVPDSLQHQWLVEMLRRFNLRFSLFDDSRYSEALH
DSDNPFETEQLIICSLDFVRRNKQRFELLLEASWDLMVVDEAHHLAWSENSPSREYQAIE
QLAEQIPSVLLLTATPEQLGQESHFARLRLLDPNRFHDYQAFIDEQQKYRPVADAVTLLL
SSESLNNDQQNAIVELISEQDIEPLLKAANSHQDEESENARRELITMLMDRHGTSRLLFR
NTRGGVKGFPHRELHEIKLPLPAQYQTAIKVSEIMGAKKSVEARAKDMLYPERIYQEFEG
ENATWWNFDPRVEWLMGFLMANRDEKVLVICAKAETALQLEQVLREREGIRSAVFHEGLS
LLERDRAAAYFASQEEGAQVLLCSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDR
IGQNRDIKISVPYLENTAQSILLRWYHEGLDAFEHTCPTGRSIYDKYYETLVNFLAKPNE
QTGFNEFIAQCREHHEKLKQQLEQGRDRLLEMNSNGGEQGQKLAEKIAAQDKDTDLVNFA
LNLFDIIGINQEDRCDNIIALHPSDHMLVPDFPGLPQDGCSITFDREKALSREDTQFLSW
EHPIIRNGLDLILSGDTGSCAVSILKNKALPVGTLLVELIYVVEAQAPKHLQLTRFLPPT
PVRLLLDLKGTNLAPQVEFESFNRQLNAINRHNASKLVNAVQKEVHAILQQSEPLVEAQA
HGLIAKAKKEADEALLTELSRMEALKAVNPNIRDDELEAIKSEHKHLLLNLDQANWRLDA
IRLVVVSHQ
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgccatttactcttggtcaacgctggataagcgatacagaaagcgaacttggattagga
accgtcgtggcgcttgatgcgcgcatggtgacgttacttttccctgccagcggagaaaac
cgcctttacgcacgcaatgactcccccatcacccgcgttatgtttaatgtggacgatacc
gtgaccagtcacgaaggctggaaactcaagatcaatgatgtccaactcgataatggcctg
ttgacctatgtgggtacgcgtctggatacggaagaagaaaacatctgcttgcgggaagtt
tttctggatagcaagctgacatttaacaagccacaggatcgcctgtttgccggtcaaatt
gaccgcatggatcgctttgccttgcgttttcgcgcccgtaaacacctaagcgagcagtcc
cgtctggccgaaagtgggctgcgcggtattcgtgccagtttgatccctcatcagctacac
attgccaatgaggtaggcaagcgtcacgcaccgcgtgtattactggcggatgaagttggt
ctgggcaagaccattgaagccggtatgattatccatcagcaattgatggccgggcgtgcc
gaacgtgtgttggtcattgtgccggacagcctgcaacaccagtggctggtcgaaatgctg
cgccgtttcaatctgcgtttttccctgtttgatgatagccgatacagcgaagcgctgcat
gacagcgataatccgtttgaaactgaacagttgattatctgttcgctggattttgttcgc
cgcaataagcagcgttttgaactgctgctggaagccagttgggatttaatggtggtggat
gaagcgcaccatctggcctggagcgaaaattcccccagccgcgaatatcaggctatcgaa
caattggcagagcaaatcccgtcggtcttactgttaacggcaaccccggagcagttgggg
caagagagtcactttgcccgcctgcgcctgctggacccgaatcgtttccacgattatcag
gcgttcattgatgagcaacagaaataccgcccggtcgcggatgcggtgacattactgttg
tccagtgaatccctgaataatgaccagcaaaatgccatcgtcgaattgatcagcgagcag
gatattgaaccgctgctgaaagccgccaacagccatcaggatgaagagagcgaaaacgcg
cgccgcgaactgatcaccatgctgatggatcgccacggcaccagccgactgctgttccgt
aatacccgtggtggtgtgaaaggctttccgcatcgtgaattgcacgagatcaaattacct
ttgccggctcaatatcagacggcgatcaaggtttctgaaatcatgggggccaaaaagtcg
gtggaggctcgcgccaaagatatgctctatcctgaacggatttatcaggaattcgaaggg
gaaaacgccacctggtggaatttcgatccccgcgtagaatggctgatgggtttcttgatg
gcaaatcgcgacgaaaaagtgctggtgatctgtgccaaagcagaaacggcgctgcaactg
gagcaagtgttgcgtgaacgcgaaggcatccgcagtgcggtgttccacgaaggcctgtcc
ttgctggaacgtgaccgtgccgccgcttactttgcttcccaagaagagggcgcgcaagtg
ctgctctgttctgaaattggctcagaagggcgtaacttccagtttgccaatcagcttgtc
atgtttgatttacccttcaatcctgatttgctggaacagcgtatcggtcgtctggatcgt
attggccaaaaccgcgatatcaaaatcagtgtgccttatctggaaaatacagcgcaatcc
attctcctgcgctggtatcacgaaggtctggacgcttttgagcacacctgtccaaccggc
cgttccatctatgacaaatattatgaaacgctggtgaatttcctcgccaagccaaatgag
caaacgggcttcaatgaatttattgcacaatgtcgcgagcatcatgagaagctgaaacag
caactggaacagggacgtgaccgtctgctggagatgaactccaacggcggcgagcaaggc
cagaaactggcagagaaaattgcagcgcaagataaagataccgatctggtgaattttgcc
ctgaatctgtttgatatcatcggcatcaatcaggaagatcgctgcgacaatattattgcc
ctgcatccctccgatcatatgctggtgccggatttccccggcttaccccaagatggctgc
tcgattacgtttgaccgtgaaaaagccctgtcccgcgaagatactcagttcctgagctgg
gaacaccccatcattcgcaacgggctggatttaatcctgtcaggcgataccggcagttgt
gcggtttccatcctgaaaaacaaggcactgccggtcggtacgctgttggttgagttgatt
tacgttgtggaagctcaagcgccgaagcacctgcaattgacccgtttcttgccgccaaca
cctgtgcgcctcctgctggatctgaaaggcaccaatctggcgcctcaggttgagtttgaa
agcttcaaccgtcagctcaatgccatcaaccgccataacgccagcaagctggtgaatgca
gtacagaaagaggttcatgcgattttgcaacaatctgaaccgctggttgaagcacaagca
catgggttgatcgcgaaggcgaagaaagaagcggatgaagcgctgttgaccgaattgtca
cgcatggaagccctgaaagcggttaacccgaatatccgtgatgatgagctggaggcgatt
aaatctgagcataaacatctgctgctcaatcttgatcaggcaaactggcgtctggatgcg
attcgtttggtggtggtttctcatcagtaa
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