Xenorhabdus doucetiae: XDD1_3615
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Entry
XDD1_3615 CDS
T03784
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo00730
Thiamine metabolism
xdo01100
Metabolic pathways
xdo01240
Biosynthesis of cofactors
Module
xdo_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
XDD1_3615 (thiC)
Enzymes [BR:
xdo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
XDD1_3615 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
CDG19300
UniProt:
A0A068QZQ9
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All DBs
Position
3823562..3825538
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AA seq
658 aa
AA seq
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MSKSNDIVISNAMIPTADISPKAHPARPRKAQRDAAQAFINTIQGVTFPNSKRIYLEGSR
QDIQVPLREIQLSPTLTGGTKEQPQFAENEPVPVYDTSGPYGDPAAVLDVTKGLHKLRQP
WIDERNDTEPVSVLSSDFTQQRLADAGLDHLRFHHRPHPLSAKPDKCVTQLHYARQGIIT
PEMEFIALRENMGRERIRSDVLRQQHAGQNFGANLPENITPEFVRQEVAAGRAIIPANIN
HPESEPMIIGRNFLVKVNANIGNSSVTSSIEEEVEKLIWSTRWGADTVMDLSTGRYIHET
REWILRNSPVPIGTVPIYQALEKVNGIAENLTWEMFRDTLLEQAEQGVDYFTIHAGVLLR
YVPMTARRLTGIVSRGGSIMAKWCLSHHQENFLYTHFREICELCAAYDVSLSLGDGLRPG
SIQDANDEAQFAELHTLGELTQIAWEYDVQVMIEGPGHIPMQLIRRNMTEELEHCHEAPF
YTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKI
AAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPDTARAYHDEALPQESGKVAH
FCSMCGPKFCSMKITQDVRDYAAKLEQEAGMEQMSEAFRSHGSELYHSAEEVAHEKSA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtccaacgatatcgttatttccaatgccatgattccaacggcggatatttca
ccaaaagcgcatccagccaggccgcgcaaggcccagagagatgccgcacaagcgtttatc
aacaccatccaaggcgtcacttttcccaactcaaaacgcatttaccttgaaggttcacgt
caagatattcaggttcccctacgtgagatccaactttctcccacattaacgggcggcaca
aaagagcagccccaatttgcagaaaacgagcctgttcccgtttatgacacgtccggccct
tatggtgatccggctgccgtactggatgtcacaaaaggcttacataaacttcgccaaccg
tggattgatgagcgcaatgatactgaaccggtttccgtcctcagttccgatttcacccaa
caacgccttgccgatgccggattggatcacctgcgctttcatcatcgcccacatccattg
agcgctaaaccggacaagtgtgtgacccaattgcactatgcgcgccaggggatcatcaca
ccggaaatggaatttatcgccctgcgtgaaaatatgggacgcgagcgcattcgcagtgac
gtcttgcgccagcaacatgccgggcaaaattttggtgccaacttaccggaaaacatcacc
cccgaatttgtccgccaagaagttgccgccggtcgcgcgattattcccgccaacattaat
catcctgaatccgagccgatgattattggccgcaatttcttggtgaaagtgaatgccaat
atcggtaactcctccgtgacgtcgtccattgaagaagaggtggaaaaattaatttggtct
acccgctggggcgcagataccgtgatggatctctccaccggacgttacattcacgaaacc
cgcgaatggatactgcgcaacagcccggttcccattggcaccgtaccgatctatcaagcg
ctggaaaaagtgaacggcatcgcggaaaacctgacttgggagatgttccgcgatactttg
ctggaacaggccgagcaaggggtggattatttcacgatccatgccggcgtgctgctgcgt
tacgtgccgatgaccgccaggcgtctgaccggcattgtctcccgtggtggctcaattatg
gcgaaatggtgcctgtcccatcatcaggaaaatttcctctacacgcatttccgcgaaatc
tgtgaactttgtgccgcctatgacgtttccctctctttgggggatggattgcgtcccggc
tccattcaggatgccaatgacgaagcgcaatttgccgaactgcatacgctcggtgaactg
acccaaatcgcatgggaatacgatgtccaagtcatgatcgaagggccggggcatatcccc
atgcagcttatccgccgcaatatgaccgaagaactggaacattgccacgaagcccccttt
tataccttagggccactgacgaccgatatcgcgccgggttatgaccatttcacctccggc
atcggcgctgccatgattggctggtttggctgtgccatgctctgttatgtcaccccgaaa
gagcaccttggtttgccgaataaagaagatgtcaaacaagggctgatcacttacaaaatc
gcggcccatgcggctgatctggccaaaggccatcccggtgcacaaatccgtgacaatgcc
atgtcgaaagcacgttttgaattccgttgggaagatcaattcaatctggcgcttgatcct
gacaccgcccgcgcttatcacgatgaggccttaccgcaggaatccggcaaagtcgcccac
ttctgttccatgtgcgggccaaaattctgctcaatgaaaattacccaagatgtgcgtgac
tacgcggccaaactggagcaggaagcgggcatggaacagatgtcagaagcctttcgttcc
catggcagcgagctttatcacagtgcagaggaggtggcgcatgaaaaatcagcctga
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