Xenorhabdus doucetiae: XDD1_3672
Help
Entry
XDD1_3672 CDS
T03784
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo03030
DNA replication
xdo03410
Base excision repair
xdo03420
Nucleotide excision repair
xdo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XDD1_3672 (polA)
03410 Base excision repair
XDD1_3672 (polA)
03420 Nucleotide excision repair
XDD1_3672 (polA)
03440 Homologous recombination
XDD1_3672 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xdo03032
]
XDD1_3672 (polA)
03400 DNA repair and recombination proteins [BR:
xdo03400
]
XDD1_3672 (polA)
Enzymes [BR:
xdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XDD1_3672 (polA)
DNA replication proteins [BR:
xdo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
XDD1_3672 (polA)
DNA repair and recombination proteins [BR:
xdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
XDD1_3672 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XDD1_3672 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CDG19357
UniProt:
A0A068QWH0
LinkDB
All DBs
Position
complement(3890020..3892914)
Genome browser
AA seq
964 aa
AA seq
DB search
MPAKFVYNDTVWHSILYSYPFIPQNDEENFMAQIADNPLILVDGSSYLYRAYHAFPPLTN
SSGEPTGAMYGVLNMLRSLIMQYKPSHVAVVFDAKGKTFRDELFAEYKSHRPPMPDDLRL
QIEPLHKMVKAMGLPILVVSGVEADDVIGTLALQAEKEGRSVLISTGDKDMAQLVTPNIT
LINTMTNTILGPEGVKEKYGIPPELMIDFLALMGDSSDNIPGVPGVGEKTALGLLQGIGG
LDDIYARLDDIASLGFRGAKTLGGKMEQHKEVAYLSYQLATIKTDVELDKTCLDLSVMPP
DADELLALFSHYEFKRWIADVQNGSWLEGNGQKPAAASAKAESIPATPTAAKISPAISPE
SYQTILERQSLEEWIEKLKQAPAFSFDTETDSLDTLTANLVGMSFAIAVGESDVEAAYLP
LGHDYLDAPQQLELHEVLTALKPLLEDANLPKIGQNLKFDRGVLARYDVALNGIVFDTML
ESYVLNSVAGRHDMDSLADRHLGYKTTTFEEIAGKGKKQLTFNQIPLEEAAKYAAEDADV
TLRLHQEMYPQLESTLTLLKVFQQIEMPLVPVLSRMERTGVLINAQTLAEHSKEITARLG
ELEKAAYELAGEEFNLASPKQLQVILFEKMQLPVLKKTPNGAPSTNEEVLEELAENHELA
RVILEHRGLAKLKSTYTDKLPQMVHPLTHRVHTSYHQAVTATGRLSSRDPNLQNIPVRNG
EGRRIRQAFVAPEGYRIMAADYSQIELRIMAHLSQDKGLLEAFAQGKDIHRATAAEVFGV
PLEQVTSEQRRSAKAINFGLIYGMSAFGLSRQLGIPRGEAQRYMDLYFERYPGVLAYMER
TRQQAADHGFVETLEGRRLYLPDIKSRNAMRRKASEREAINAPMQGTAADIIKLAMIAVD
NWIVSEQPDVRMIMQVHDELVFEVHESALGTAGQKIRELMEQSMQLDVPLKVDIGLGDNW
DQAH
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcaaaattcgtctataacgatacagtatggcattctattctttattcataccca
ttcatccctcagaacgacgaagaaaattttatggcacagatagcagacaatcccctgatt
ttggttgatggttcttcatacctttatcgtgcataccatgcgtttccgccactgaccaac
agttccggcgagccgacgggcgccatgtatggcgtgttgaacatgctgcgaagtttgatc
atgcagtataaacccagtcatgtggcggtcgtgtttgatgccaagggtaaaacgttccgt
gatgaactttttgctgaatataaatctcatcggccacccatgccggatgatttgcgtttg
caaattgaaccgttgcacaagatggttaaggcgatgggtctgcccattctggtggtatcc
ggcgttgaagctgacgatgttatcgggactttggctttgcaggctgaaaaagaaggccgt
tcggtgctgatcagcacgggagataaggatatggcgcaattagtgacgccaaatatcacc
ctgattaacaccatgaccaacaccatcttggggccggaaggggttaaggaaaaatatggt
attccccctgaactgatgatcgattttctcgccctgatgggggattcttccgataacatt
ccgggcgtgccaggcgtgggggagaagaccgcgttggggctattgcagggaattggcgga
ttagatgatatctatgcccgacttgatgacattgcctcactcggtttccgtggcgccaag
acattgggcggtaagatggagcagcataaagaggtggcctatctttcttaccaattggcg
accatcaaaaccgatgttgagctggataaaacttgtctggatctttcagttatgccgccg
gatgcggatgagttactggcgctgttcagccattatgaatttaaacgttggatcgcagac
gtacagaatggcagttggctggaaggtaatggacagaaaccggctgctgccagtgccaag
gcagaatccattcccgctacgccaaccgctgctaaaatttcaccggccatttcaccggaa
agttatcaaacgattcttgaacgccagtctctggaggagtggattgaaaagcttaagcag
gcgccggcattctcttttgatactgaaactgacagtcttgatacgctgacagccaatctg
gtggggatgtcttttgccattgctgtgggagagtcagacgttgaagccgcttatctgcca
ttgggacacgattatctggatgcgccgcagcaactggaattacatgaggttcttaccgcc
ttaaagccactgctggaggatgctaacctgcctaaaattggtcaaaacctgaaatttgat
cggggcgtgctggcgcgttatgacgttgccctgaatggcattgtttttgataccatgctg
gaatcgtatgttttgaacagtgtggcggggcggcatgatatggatagccttgcggatcgt
catttgggctataaaaccaccacatttgaagagattgcgggcaaaggcaaaaaacaactc
accttcaatcaaattcccttggaagaagcggcaaaatatgcggcggaagatgcggatgtg
actttgagactgcatcaggagatgtatcctcaattagagagcaccctaaccctgctaaaa
gttttccagcagatcgaaatgccgttggtgccagtgctgtcccgtatggaaagaaccggc
gtgctgatcaatgcgcaaacgctggcagaacattcaaaggagatcaccgcgcgtttgggt
gagctggaaaaagccgcttatgaactggcaggggaagaattcaatctggcgtcacccaaa
cagctacaagtgattttatttgaaaaaatgcagttgccggtattgaaaaagacgccgaat
ggcgcaccctcaacgaatgaagaggtgctggaagagttggcggagaaccatgaattagcc
agagtgattttggaacatcgtggtctggcaaaactgaaatccacctatacggataagttg
cctcagatggtacacccactgacccatcgtgttcatacctcttatcatcaggcggtgacg
gcaacgggacgtctctcttcccgtgatcccaatttgcaaaacattcctgtccgcaatggt
gaagggcgacgcatccgtcaggcttttgttgcgccggaaggctaccgcattatggcggcg
gactattcacagattgaattgcgcattatggcgcacttgtcgcaggacaaaggcttgttg
gaggcattcgcccaaggtaaggatatccaccgcgcgacggcggcggaagtgtttggcgtg
ccattggaacaggtgaccagcgagcagcgtcgcagtgccaaggcgattaactttggcctg
atttatggcatgagtgcgtttggtttatcccgccagttaggtattccgcgtggtgaagcg
caacgttatatggatctctattttgaacgttatccgggggtgttggcttatatggagcgt
acacgccagcaagcggcggatcatggatttgtcgaaacgttggaaggccgtcggttgtat
ctgccggatatcaaatcgcgtaatgccatgcgccgtaaggcatcagagcgtgaagccatc
aacgcaccgatgcagggaacggcagcggatatcatcaaattggcgatgattgcggtagat
aactggattgtcagtgagcagcccgatgtgcgcatgatcatgcaggttcacgatgagctg
gtatttgaagtgcatgaatcagcgctgggaaccgcagggcagaaaatcagggagctgatg
gaacaaagtatgcagcttgatgtgccgttaaaagtggatattgggctgggtgataattgg
gatcaggcacactga
DBGET
integrated database retrieval system
