Xanthomonas dyei: NYR95_00190
Help
Entry
NYR95_00190 CDS
T09460
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xdy
Xanthomonas dyei
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xdy03032
]
NYR95_00190
03400 DNA repair and recombination proteins [BR:
xdy03400
]
NYR95_00190
Enzymes [BR:
xdy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NYR95_00190
DNA replication proteins [BR:
xdy03032
]
Prokaryotic type
DNA Topoisomerases
NYR95_00190
DNA repair and recombination proteins [BR:
xdy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NYR95_00190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
WOB56080
LinkDB
All DBs
Position
45317..46630
Genome browser
AA seq
437 aa
AA seq
DB search
MACPHGVVVALTRPSAARPNNRCQSFDLYAMKAKRVVRNVAATASAAGTLATAATGAVVA
TAAVATVAAVAQAKATARAAGLTYVNDQQPGISRRKAGKSFSYRSADGQRIADADTLQRI
RALAIPPAYTEVWICAKPNGHLQATGRDARRRKQYRYHADWAQVRGEGKFERVIAFGTAL
PKLRRRLRRDLALPGFPREKVLAIVVALLADTLVRVGNAEYARSNRSYGLTTLRNRHMEF
LKGGRARLKFRGKSGQDHDIEVDDKHLVKLIRQCQQLPGQSLFQYRDDDGQLQPVDSGEV
NDYLREAMGEDFTAKDFRTWGGTLAALQRLARLPLPERSSERALMQVQNDVIREVADALG
NTPSVCRKAYIDPCVFEGWRAGQLQAIASGVRGERQWEAATLRFLTDSRSTQRKATKSGK
AATPKPNPKPSRRKRAA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atcgcttgcccacacggcgttgtcgttgcgttgacgcggcctagcgctgcgcggcccaac
aatcggtgccagtccttcgacctgtacgcaatgaaagccaaacgtgttgttcgcaatgtc
gccgccacggccagtgccgccggcacgctcgccaccgccgccaccggtgcggtcgtcgca
acggccgccgtcgccaccgtggccgcggtggcacaggccaaggccaccgcgcgggcggca
gggctgacctatgtcaacgatcagcagccaggcatcagccggcgcaaggcgggcaagagc
ttcagctaccgcagtgccgacgggcagcgcatcgccgatgccgacaccttgcagcgcatc
cgcgcgttggccattccgccggcctatacagaggtgtggatctgcgccaaacccaacggc
catctgcaggccaccgggcgcgacgcgcggcggcgcaagcagtaccgctatcacgccgat
tgggcgcaggtgcgtggcgaaggcaagttcgagcgggtaatcgccttcggcacggcactg
cccaaactgcggcggcgcttgcgacgcgatctggcgctgcccggctttccgcgtgagaag
gtgctggcgattgtggtcgcgctgctggccgacaccttggtgcgcgtgggcaatgccgaa
tacgcgcgcagcaatcgctcgtacgggctgaccacgctacgcaatcgccacatggaattt
ttgaaaggcgggcgggcacggctcaaattccgcggcaagagcggccaggatcacgacatc
gaagtggacgacaagcacctggtcaaactgatccggcaatgtcagcagctgccggggcaa
tcgctgtttcagtatcgcgacgacgacggccagctgcagccagtggattcgggcgaggtc
aacgactatctgcgcgaagcgatgggcgaggatttcaccgccaaggatttccgcacctgg
ggcggcacgctggccgcattgcagcgcctggcgcgtttgccgctgcccgagcgcagcagc
gaacgcgcgctcatgcaggtgcagaacgatgtcatccgcgaggtagccgatgcactgggc
aacacgccatcggtgtgtcgcaaggcctacatcgacccttgcgtgttcgaaggctggcgc
gccgggcaactgcaggcgatagccagcggcgtgcgcggcgagcgccagtgggaagcggcc
acgctgcgctttctgaccgactcgcgcagcacgcaacgcaaggccaccaagtcgggcaag
gcggctacgccgaagcctaatcccaagcccagccgccgtaagcgtgctgcgtga
DBGET
integrated database retrieval system
