Xanthomonas dyei: NYR95_03960
Help
Entry
NYR95_03960 CDS
T09460
Name
(GenBank) glycoside hydrolase family 28 protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy00040
Pentose and glucuronate interconversions
xdy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NYR95_03960
Enzymes [BR:
xdy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
NYR95_03960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
WOB54757
LinkDB
All DBs
Position
926769..928157
Genome browser
AA seq
462 aa
AA seq
DB search
MKFLTAAIGGVCLLLAAQASAVTFATGDTRAVAQPAPPATCAPSLKAGLTPTGRQFDDAL
ERSPPDTKTIQAALNACKNGSVLLTSGSGDAFLTGPLTIPTGVTLVVDQGVTLYGSRNPV
DYGGSCGVAGPKSGGCAPLISVKGAKSGVMGIRTGGRQGTIDGRGDLTMLGKSTTWWQLG
EDAKAAGQVQNTPDLIKVQNSTEFTLYDINLINAAYFHFFAHIVDGLTIWGVRVKSPATS
PNTDGLDLDSVVNATLHDNDVMGGDDCVAIKTIASKSANITVRNTRCYGTHGISIGSEVM
SGVSNVLVDNNALVSTDDAGNRSTDNNGLRIKTSIVKGGAVSQVTYHTCLYGVTSPLVIN
PFYAGGSSGTKPTFSEIVVDGLRSTNDAGGKGWILRGYDAQTRLDLVLANVVTGNTSVNA
SNAQIGLSNSALTPTGTGVTTAQLQLGGAIPTCSGAPRFPAL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttctaaccgccgccatcggcggtgtctgtctgctgcttgccgcgcaggccagt
gccgtcactttcgccaccggcgatacccgcgctgtcgcgcaacccgcacctccagccacg
tgtgcgccgtccttgaaagctgggttgaccccgaccgggcgtcaattcgatgatgcgttg
gagcgctcgccgcccgacaccaagaccatccaggccgcgctcaatgcctgcaaaaacggc
agtgtgctgttgaccagcggcagcggtgacgcgtttctgaccggaccgctgaccattccc
acgggtgtcacgctggtggtcgaccagggcgtcaccttgtacggctcacgcaatccggtc
gactacggcggcagctgcggcgtggcaggtcccaagagcggcggctgcgcgccgctgatc
agcgtcaagggcgccaagtcgggcgtcatgggcatccgcaccggcgggcgtcagggcacc
atcgatggccgcggcgatctgaccatgctgggcaagagcaccacctggtggcaattgggc
gaagacgccaaggcggccggccaggtgcagaacaccccggacctgatcaaggtgcagaac
tcaacggaatttacgctgtacgacatcaacctgatcaacgcggcgtacttccatttcttc
gcgcatatcgtcgatggcctgaccatctggggcgtgcgggtgaagtcgcccgccaccagt
cccaataccgacggcctggatctggacagcgtggtcaatgccaccctccacgacaacgat
gtgatgggcggcgacgattgcgtggcgatcaagaccatcgcttccaagtcggccaacatc
accgtgcgcaatacgcgctgctatggcacgcatggcatctccatcggcagcgaagtgatg
tccggcgtcagcaatgtactggtcgacaacaacgcgctggtgtctaccgacgacgcaggc
aatcgcagtaccgacaacaacgggttgcgcatcaagaccagcatcgtcaagggtggggcg
gtgagccaggtcacgtatcacacctgcctgtacggcgtgaccagcccgctggtgatcaac
ccgttctatgccggcggtagcagcggcaccaagccgaccttcagcgaaatcgtcgtcgac
gggctgcgtagtacgaacgatgccggcggcaagggctggatcctgcgtggctacgatgcg
cagacccgtcttgatctggtgctggccaacgtggtgaccggcaacacatcggtcaatgcg
agcaacgcgcagatcggtctgagcaacagcgcgctgacaccgaccggtaccggcgtcact
actgcacagctacaactgggcggcgcgataccgacctgctcgggcgcgccgcgcttcccg
gcgctgtga
DBGET
integrated database retrieval system
