Xanthomonas dyei: NYR95_03970
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Entry
NYR95_03970 CDS
T09460
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
xdy
Xanthomonas dyei
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xdy01011
]
NYR95_03970
Enzymes [BR:
xdy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NYR95_03970
Peptidoglycan biosynthesis and degradation proteins [BR:
xdy01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NYR95_03970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
WOB54759
LinkDB
All DBs
Position
929727..931118
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AA seq
463 aa
AA seq
DB search
MNSMTGPKWLIPMALMLGLAACSSAPKKNVGAKGGGAIKGVKVDGKGPAYVATGCPSTSP
YAAAKEDPSTRGDYTAGGLYKPGVKDATPDHVPNVACIPEPLVTDEPRSAVGNRSPYEVL
GKRYVVMDNPGDYVERGTASYYGSKFHGRLTSNKEVYDMYAFTAAHKTLPLPSFALVTNT
DTGDSVVVRVNDRGPFHDGRVIDLSYAAAVKLGITGKGTGNVEVRGLTEADNGNLLAKRN
RGQVPATSAVATARPASGSSQIDGLVQRLPTRPVPPRPVATGAGTAVATAAVATAAAPVT
AAGERWRYRVADSRQPGNADNFDAWMKTQGVRVATGKPAAAVQQRPASATTAPVAVAVVK
APESVAARPLTPDPMPAKAPSVAEAALGDILLQVASFASRENANRALSQLASAGIAGASV
SDIVSGGRTLWRLRVNARDHANASEIAQRIAGLGFGRPQIVAN
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcatgacaggccccaagtggctgatcccgatggcgctgatgctcggcctggcg
gcctgtagcagcgctccgaagaaaaacgtcggtgccaagggtggcggcgccatcaagggc
gtcaaggttgacggcaagggaccggcgtacgtcgccaccggatgcccgtcgacctcgccg
tatgcggccgccaaggaagacccgtccacgcgcggcgactacaccgccggcggcctgtac
aaacccggcgtcaaggacgccacgcccgaccacgtccccaatgtggcctgcatccccgaa
ccgctggtcaccgacgagccgcgctcggcagtcggcaatcgctcgccctatgaagtgctg
ggcaagcgctacgtggtgatggacaacccgggcgactatgtcgaacgcggcaccgcttcg
tattacggcagcaaattccacggccgcctgacctccaacaaggaggtctacgacatgtac
gccttcaccgccgcgcacaagacgctgccgctgcccagtttcgcgctggtgaccaatacc
gacaccggcgattcggtggtggtgcgcgtcaacgaccgtggcccgtttcacgatggccgc
gtgattgatctgagctacgccgccgcggtcaagctgggcatcaccggcaaaggcaccggc
aatgtcgaagtgcgcgggctgaccgaagccgataacggcaacctgctggccaagcgcaat
cgtggccaggtgccggccacttcggcggttgccaccgcgcggccggcgtcgggtagcagc
cagatcgatggtctggtgcagcgtctgcccacgcgcccggttccgccgcgcccggtggcg
acaggtgcgggcacagcggttgccacggctgcagtagcaactgccgcagcaccggtcact
gcggccggcgagcgttggcgctaccgcgtggccgattcccgccagcctggcaatgccgac
aacttcgatgcctggatgaagacgcagggcgtgcgtgtggccaccggcaagcccgccgct
gccgtgcagcagcgaccggcaagcgcgacaacagccccggtggccgttgccgtggtcaag
gcaccagaaagcgtggctgcgcgtccgctcacgccggacccgatgccggccaaggcgccg
agcgtggccgaggctgcgcttggcgacatcctgttgcaggtcgccagctttgccagccgc
gaaaacgccaaccgcgcgctgtcgcagctggcctcggctggcatcgccggtgccagcgtc
agcgacatcgtcagcggtggccgcaccctgtggcgcctgcgcgtcaacgcacgcgaccat
gccaatgcatcggagattgcccagcgcatcgccggcctgggttttggacgtccgcagatc
gttgccaactga
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