Xanthomonas dyei: NYR95_04485
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Entry
NYR95_04485 CDS
T09460
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy00260
Glycine, serine and threonine metabolism
xdy00460
Cyanoamino acid metabolism
xdy00630
Glyoxylate and dicarboxylate metabolism
xdy00670
One carbon pool by folate
xdy00680
Methane metabolism
xdy01100
Metabolic pathways
xdy01110
Biosynthesis of secondary metabolites
xdy01120
Microbial metabolism in diverse environments
xdy01200
Carbon metabolism
xdy01230
Biosynthesis of amino acids
xdy01240
Biosynthesis of cofactors
xdy04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NYR95_04485
09102 Energy metabolism
00680 Methane metabolism
NYR95_04485
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NYR95_04485
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NYR95_04485
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NYR95_04485
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NYR95_04485
Enzymes [BR:
xdy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NYR95_04485
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Phage_capsid
Motif
Other DBs
NCBI-ProteinID:
WOB54850
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Position
1061879..1063132
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AA seq
417 aa
AA seq
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MFSRDARLETYDPELAKAIAAEVGRQEDHVELIASENYCSALVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDIAEQLAIDRIKQVFGADYANVQPHSGSQANQAVYLALLQPGDTILGMS
LAHGGHLTHGAKVNASGKLFNAVQYGVDEQGLIDYDEVQRLATEHKPKMVIAGFSAYSQK
IDWARFRAIADSVGAYLFVDMAHVAGLVAAGVYPSPMEHAHVVTSTTHKTLRGPRGGIIV
AKGASEELQKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKTYQQQVVKNAQAMAN
TLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTS
GLRLGTPAITTRGYKEQDSIDLANWIADVLDAPADDAVLAKVRDAVTAQCKKYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgcgcgacgcccgactggaaacctacgaccccgaactggccaaggccatcgcc
gctgaagtcggccgccaggaggatcacgtcgaactgatcgccagcgagaactactgcagc
gcgctggtgatggaggcacagggcagccagctgaccaacaagtacgccgaaggctatccg
ggcaagcgctattacggtggttgcgagttcgtcgacattgccgagcaactggcgatcgac
cgcatcaagcaggtgtttggcgccgactatgcaaacgtgcagccgcacagcggctcgcag
gccaaccaggcggtctatctggcgctgctgcagccaggcgacaccatcctgggcatgagt
ctggcccatggtggccacctgacccacggtgccaaggtcaacgcgtcgggcaagttgttc
aacgcggtgcagtacggcgtcgacgagcagggtctgattgattacgacgaggtccagcgc
ctggccaccgagcacaagccgaagatggttatcgccggcttctcggcgtattcgcagaag
atcgactgggcgcgcttccgcgccatcgccgacagcgtcggtgcgtatctcttcgtggat
atggcgcatgtcgccggcctggtcgccgccggggtgtaccccagcccgatggagcacgcg
catgtggtgacctcgaccacccacaagaccctgcgcggcccgcgcggcggcatcatcgtc
gccaagggtgccagcgaagagctgcagaagaagctgcagtcgatcgtgttccccggcatc
cagggtggcccgttgatgcacgtgatcgcggccaaggcggttgcgttcaaggaagcgttg
gagccggccttcaagacctaccagcagcaggtggtcaagaacgcccaggccatggccaac
acgctgatcgcgcgcggctacaagatcgtctccggcggcaccgaaaatcatctgatgctg
gtggatatgatcggccgcgatgtctccggcaaggatgcagaggccgcgctcggcaaggcg
cacatcaccgtcaacaagaactcggtgcccaacgacccgcgctcgccgttcgtgacctcg
ggcctgcgcctgggcaccccggccatcaccacgcgcggttacaaggagcaggacagcatc
gacctggccaactggatcgccgacgtgctggatgcaccggccgacgacgcagtgctggcc
aaggtgcgcgatgcagtgaccgcgcagtgcaagaagtatccggtgtatggctga
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