Xanthomonas dyei: NYR95_04655
Help
Entry
NYR95_04655 CDS
T09460
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy00300
Lysine biosynthesis
xdy00550
Peptidoglycan biosynthesis
xdy01100
Metabolic pathways
xdy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NYR95_04655 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NYR95_04655 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NYR95_04655 (murF)
Enzymes [BR:
xdy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
NYR95_04655 (murF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WOB54880
LinkDB
All DBs
Position
1097100..1098626
Genome browser
AA seq
508 aa
AA seq
DB search
MKLTPLSLIAHWAGGELHGDDAMIDAVGNDTRTLSNGSLYVALRGERFDGHDFAADALAQ
GASGLLVDHLLPTLSVPQVLVQNTELALARIAAGMQRDRATRVIALTGSNGKTSVKALLL
AILTEAGRVDDTTVYATPGNRNNEIGLPLAVIAAPDDADVAIYEMGAGKPGDIAYLTDVA
RPHVALVNNIAPAHLERLGSLLGVAQTKGAIYAALPSDGVAVINADDAFGAWFEQQLHAQ
PVQGRRVLRYGLQASADITARHLQLQADGARFTLATPQGEAQIALPLPGRHNVLNALAAT
GLAMGAGIGLPIIAAGLARARPVAGRQIAHRLPGGAVLIDDSYNANPGSLDAAIDALAAA
PGAGWLVLGDMRELGAEGAALHAAAGRRARAAKLQRLYALGELSAAAAQAFGEGGRVFAT
HAELIDALHADLGVAGAGEKQQHAPENMQGNVLIHDQQSQSMDALPGPRSPVPGPGSTTL
LVKGSRGSAMDRIVAALLAPSEDASHAA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccccgctgtcgttgatcgcgcattgggctggcggcgagctgcacggcgac
gatgccatgatcgatgcggtcggcaacgacacgcgcacgctgtccaacggcagcctgtat
gtggcgctgcgcggcgagcggttcgacgggcacgacttcgctgccgatgcgctcgcgcag
ggtgccagcggtttgctggtggatcatctactgccgacgttgagcgtgccgcaggtgctg
gtgcagaacaccgagctggcgctggcacgcattgccgccggcatgcagcgcgatcgcgcc
acccgcgtgatcgcgttgaccggttccaacggcaagaccagcgtcaaggcactgctgctg
gccatcctgaccgaagcagggcgtgtcgatgacaccaccgtctatgccacgccgggcaat
cgcaataacgaaatcggcttgccgctggcggtgatcgccgcaccggacgacgcagatgtt
gcgatctacgaaatgggtgccggcaagccgggcgatatcgcctacctcaccgacgtcgcg
cggccgcatgttgcgctggtcaacaacatcgcgccggcgcacctggagcgcctgggcagc
ctgctcggcgtcgcacagaccaagggtgcgatctacgccgcgctgccctccgatggcgtg
gcggtgatcaatgccgacgatgccttcggcgcctggttcgagcagcaactgcacgcgcag
ccggtgcagggccgtcgcgtgttgcgctatggcctgcaggccagcgccgatatcaccgca
cgtcatctgcaactgcaggccgatggcgcacggttcacgctggcaaccccgcagggcgag
gcgcagattgcgctgccattgccgggccgccacaacgtgctcaacgcattggctgcgacc
ggattggcgatgggcgccgggatcgggctgccgatcatcgccgctggcctggcgcgggcg
cgtccagtggctggccggcagatcgcccatcgtttgcccggtggcgcagtgctgatcgac
gacagttacaacgccaaccccggctcgttggatgcggccatcgatgcactggccgccgcg
cctggcgctggctggctggtgctgggcgacatgcgcgaactcggcgccgaaggtgcggcg
ctgcatgccgcggccggacgtcgcgcacgcgcggccaagttgcagcgtctgtacgcgttg
ggcgagctcagtgccgctgccgcgcaggcgttcggcgagggcggtcgcgtgtttgccaca
catgcggaattgatcgatgcattgcacgcggacctgggtgtagccggggccggggaaaag
caacagcacgcaccagaaaatatgcagggaaatgttttgattcacgatcagcaatcgcag
tctatggatgccctcccgggtccccggtccccggtccccggtcccggctccaccaccctt
ctggtaaaaggctcccgcggcagcgccatggaccgcatcgtcgccgcgctgctcgcaccg
tcggaggatgcctcccatgctgcttga
DBGET
integrated database retrieval system
