Xanthomonas dyei: NYR95_06330
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Entry
NYR95_06330 CDS
T09460
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy00550
Peptidoglycan biosynthesis
xdy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NYR95_06330 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xdy01003
]
NYR95_06330 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xdy01011
]
NYR95_06330 (pbpC)
Enzymes [BR:
xdy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
NYR95_06330 (pbpC)
Glycosyltransferases [BR:
xdy01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NYR95_06330 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
xdy01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
NYR95_06330 (pbpC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
PBP1c_linker_2
BiPBP_C
Transpeptidase
PBP1c_linker
DUF7358
Motif
Other DBs
NCBI-ProteinID:
WOB55172
LinkDB
All DBs
Position
1447184..1449604
Genome browser
AA seq
806 aa
AA seq
DB search
MDDPRTDTMSTTTQDCVAEHKAVTHTRRYHWRRWLRWSAAAVLAMVLVLDLAFPLPLPKS
RDTSTLVVARDGTPLRAFADRNGVWRYPASPDTVSPLYLQALLNYEDRWFWRHPGVNPWG
LLRAGGQWLGQGRIVSGGSTLTMQVARILDPHTRTPWGKAKQLLRALQLEAHLSKREILT
LYLERAPYGGTIEGVDAASWAYLGKPATALSQAEAALLAVLPQSPSRLRPDRHPEAAQRA
RDKVLDRMVELGVWSRAQVDDARIEPVVTRALKPPLHAALLAQRLHSAQPRTARIVTTLD
AELQRTLEERVATYFSQLPERTSAALLVVDNATMEARAYVGSASFGDRKRLGHVDMVQAW
RSPGSTLKPFLYGMALDDGLIHSESLLVDAPQSFGDYRPGNFDAAFNGPVSAATALRLSL
NVPAVDLLDRIGPARFAARLSNAGIALHFPRGSTPSLALILGGTGAQLQELVGAFAALNR
GGIAGRVRYTPDDARIDRRLMSPGAAWIVREILQSNPRPGYGSGTFDTAARPGVAWKTGT
SYGYRDAWAIGGTRRYTVGVWVGRPDGTPLPGQYGAVTALPLMFEVIDALPRNAGDSAPL
PMPATVQSREICWPLGGALEQTPPPLCARRAEAYALDGALPPTFAERDARLWQSGRLQFE
VDAHSGQRLSQECTQPHARTPRALARWPALVSPWLSAAERTAAQLPPLAPDCLPDGRMTG
GGVLRIDGLSDRATLARANDTARPVRLQLRALGSEARIDWLLDGRWIAQTDGRQGFQRDF
AEVGEHTLTAMASDGAWTQVRFRVLR
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggatgatccacgcaccgacacaatgagcaccacgacacaggactgtgtggccgagcac
aaggcagtgacgcacacacgcaggtaccactggcgacggtggctacgctggagcgcagcg
gcggtgctggccatggtgctggtgctggacctggctttcccgctgccgctgcccaaatcg
cgcgacacctccaccctggtggtggcgcgcgatggcacaccgttgcgcgcgttcgccgat
cgcaacggtgtgtggcgctatccggccagcccggacacggtgtcgccgctgtatctgcag
gctttgttgaactacgaagaccgctggttctggcggcatcccggcgtcaacccgtggggt
ttgttgcgtgccggcgggcagtggttggggcaggggcgcatcgtctccggcggttcgacc
ttgaccatgcaggtggcgcgcattctggacccgcatacgcgcacgccatggggcaaggcc
aagcagttgctgcgcgcgctgcagctggaagcgcatctgagcaagcgcgagattctcacc
ctgtatctggagcgcgcgccctacggcggcaccatcgaaggcgtggacgcggccagttgg
gcgtacctgggcaagccggccactgccttgtcgcaggccgaagcggcgttgctggcggtg
ttgccgcaatcgcccagccggctgcgtccggaccgtcaccctgaagcggcgcagcgtgcg
cgcgacaaggtgctcgatcgcatggtggagctgggcgtgtggtcgcgcgcgcaggtcgac
gatgcccgcatcgagccggtggtgacgcgcgcgctcaagccgcccttgcatgccgcgctg
ctggcgcagcggttgcatagcgcgcaaccgcgcaccgcacgcatcgtcaccacgctggat
gcggaattgcagcgcacgctggaagaacgcgtggccacgtatttttcgcaactgcccgag
cgcacttcggccgccttgctggtggtcgacaacgccacgatggaagcgcgcgcctatgtc
ggctcggccagcttcggcgatcgcaaacggcttggccatgtggacatggtgcaggcctgg
cgctcgcccggctccacgctcaaaccgtttctgtacggcatggcgctggacgatggcttg
atccattcggaaagtctgctggtggacgcgccgcagagcttcggcgactaccggcccggc
aacttcgatgccgcgttcaacggaccggtgagtgcggccaccgcattgcgcttgtccttg
aatgtgccggcggtggacctgcttgatcgcatcggcccggcacgctttgccgcgcggctg
tccaatgccggcattgcgctgcacttcccgcgtggcagcacgccatcgctggcgttgatc
ctgggcggcaccggcgcgcaattgcaggaattggtgggcgcgttcgcggcgctcaatcgt
ggcggtatcgccgggcgcgtgcgctacacgccggacgatgcacggatcgatcgacggttg
atgtcgccgggcgcggcctggatcgtgcgcgagattttgcagagcaatccgcgccccggc
tacggcagcggcaccttcgataccgccgcacgcccgggggtggcctggaagaccggcacc
agttacggctaccgcgatgcctgggccatcggcggcacacggcgctataccgtaggtgtg
tgggttggccgcccggatggcacgccgttgccgggccagtacggtgcggtgaccgcattg
ccgctgatgttcgaagtcatcgatgcattgccgcgcaacgctggcgacagtgcgccgctg
ccgatgccggccacggtgcagtccagggagatctgctggccgctcggcggtgcgctggag
cagacgccgccgccactgtgcgcgcggcgtgccgaggcctacgcactggatggcgcgctg
ccccccacgtttgccgaacgcgatgcgcggttgtggcaaagcgggcggctgcagttcgag
gtggatgcgcacagcggccagcgcctgtcgcaggagtgcacccagccacatgcgcgcacg
ccacgcgcattggcacgctggccggcactggtgtcgccctggctcagcgcggccgaacgc
accgccgcgcagctgccgccgttggcaccggactgcctaccggacgggcgcatgaccggc
ggcggcgtgctgcgcatcgatggattgagcgaccgcgccacgttggcccgcgcaaacgac
accgcacgcccggtgcgcctgcagttgcgtgcgctgggcagcgaagcgcgcatcgactgg
ctgctggacggtcgctggattgcacagaccgatgggcgccagggatttcagcgcgacttt
gccgaagtgggagagcacacgctcaccgccatggccagcgacggcgcctggacccaggtg
cggttccgcgtcttgcgttga
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