Xanthomonas dyei: NYR95_10540
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Entry
NYR95_10540 CDS
T09460
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
xdy
Xanthomonas dyei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_16
TPR_2
TPR_14
TPR_12
TPR_17
TPR_7
TPR_1
TPR_11
TPR_9
TPR_20
Alkyl_sulf_dimr
TPR-S
Motif
Other DBs
NCBI-ProteinID:
WOB55922
LinkDB
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Position
complement(2405441..2407429)
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AA seq
662 aa
AA seq
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MTGASIALTPMQQAEQLRGQQRYAEALAIYERVLRADPRDKGAYTLRALTLSDLGSAQLA
AEAMWRHPDWFSQQERERIDNDRVARMIGWASAEPVDAAHRYAETDQALVNVARIERDAP
PQVAWEATRLRVDSLVALNQRQHYRDVVANYQALRADGIEVPSYVLPTVGDSLMGLRRPT
EAEAVLRQALQHTPDDFNTQLLLGYALLEQERFDQAMPLFEQLAAPQAPWPRRAGATSGY
ENWDRFSADVALATARSAANDNRGADQVLRERIAIGPDNAELQAALASIESRRGHTTQAL
QRNQIALTLDPHQKQARSGVVENQRDLDRLDLADAQFKTLRTEYPDDVGLQRLGASLERQ
RGWQVHLSHAWGRSDNDNSATATSPLGNHFGSSLLEAESPLLGERWRVGLRAREDWADFQ
DTRVRYRSFWLGTHYRYDRLDLSAYGGRALDDFDRDGTAWALDAGWRFSDAWYGSVAWRT
RDPEASLQARRLGITGDSIGATLRWTPNDETRWDLQARQLRYSDGNRRNQLDLSGSQRLW
ARPHVLVDGLLSASAGRAEDDRVVDYFNPRRSAGVAAGVRIEQIGWRRYDYAFRQRLEVT
AGPTYQSGFGSQWVPALVYRHLWSLGDGSALTYGVSWSRPVYDGRREHQLGLDLDFRWGG
TP
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
gtgactggcgcctccatcgcccttacgcccatgcagcaagccgagcaattgcgcggccag
cagcgctatgcggaggcgctcgccatctacgaacgcgtgttgcgtgccgacccgcgcgac
aaaggcgcgtacacgctgcgtgcgctcacgctcagcgatcttggcagcgcgcagcttgcc
gcagaagcgatgtggcgccatccggactggttttcgcagcaggagcgcgagcgcatcgac
aacgatcgcgtcgcgcgcatgatcggctgggccagcgccgagccggtcgatgccgcgcac
cgctatgccgagaccgatcaggcattggtcaatgtggcgcgcatcgagcgcgacgcacca
ccacaggtggcctgggaagcgacgcgcttgcgtgtcgacagcctggttgcgctcaatcag
cgtcagcactatcgcgacgtggtggccaactatcaggcattgcgtgcggacggcatcgag
gtgcccagctacgtgctgccgacggttggcgattcgctgatggggctgcgtcgccctacc
gaagccgaagccgtgctgcgacaagcgctgcaacacaccccggacgacttcaacacacaa
ctactgctcggctacgcgttgctggagcaggaacgcttcgatcaggcgatgccgttgttc
gagcagctggccgcgccgcaagcgccttggccacgtcgtgccggcgcaaccagcggctac
gaaaactgggaccgctttagcgccgatgtcgcactcgccaccgcgcgctccgcagccaac
gacaaccgcggtgcggaccaggtattgcgcgagcgcatcgcgattgggcccgataatgcc
gagctgcaagcggcactggcatcgatcgaatcgcgccgcggacacaccacgcaagccctg
caacgcaatcagatcgcgctgacgctggacccgcatcaaaaacaggcacgcagcggcgtg
gtcgaaaaccagcgcgatctcgatcgcctggatctggccgatgcgcagttcaagaccttg
cgcaccgagtaccccgatgatgtcggcctgcaacggctgggtgcgtcgctggagcgccaa
cgcggctggcaggtgcatctgagccatgcgtggggccgcagcgacaacgacaacagcgcc
accgcaacctcgccgctcggcaatcatttcggcagctcgctgctggaagccgaatcgccg
ctgctgggcgagcgctggcgcgtgggcttgcgcgcgcgcgaggactgggccgattttcag
gacacccgcgtgcgctatcgcagcttctggctgggcacgcactaccgctacgaccggctg
gatctgagcgcctacggtggccgcgcgctcgatgatttcgatcgcgatggcaccgcctgg
gcactggatgcgggttggcgattctccgatgcgtggtacggcagcgtcgcctggcgcacg
cgcgatccggaggcctcgttgcaggcgcgtcggttgggcatcaccggcgacagcatcggc
gcgacgctgcgctggacacccaacgatgaaacgcgctgggacctgcaggcacgccagctg
cgttacagcgatggcaatcggcgcaaccagctcgatctgtccggcagtcaacgcctgtgg
gcacgcccgcatgtgctggtcgacgggctgctttccgcatctgccgggcgtgccgaagac
gaccgcgtggtcgattacttcaacccacgccgcagcgcaggcgtggctgcgggtgtgcgg
atcgaacagattggctggcggcgttacgactacgcgtttcggcagcgtctggaagtcacc
gccggcccgacctatcaatccggctttggcagccaatgggtgcccgcgctggtctatcgg
catctgtggtcgctgggcgatggcagcgcgttgacgtatggcgtgagctggtcgcgcccg
gtctacgacggccggcgcgaacaccaacttggattggacctggatttccgatggggaggt
acgccttga
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