Xanthomonas dyei: NYR95_10810
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Entry
NYR95_10810 CDS
T09460
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xdy
Xanthomonas dyei
Pathway
xdy03410
Base excision repair
xdy03430
Mismatch repair
xdy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NYR95_10810 (recJ)
03430 Mismatch repair
NYR95_10810 (recJ)
03440 Homologous recombination
NYR95_10810 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xdy03400
]
NYR95_10810 (recJ)
DNA repair and recombination proteins [BR:
xdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NYR95_10810 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NYR95_10810 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NYR95_10810 (recJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WOB55966
LinkDB
All DBs
Position
2479098..2480837
Genome browser
AA seq
579 aa
AA seq
DB search
MTSTPRIVRRPPGQAGSWPDAMLPLLRRIYAARGVRDAQGAQPRLGQLLSPELLHNSDVA
ANLLADAIAQQRRILVVGDFDCDGATACAVGVRGLRMLGALDVHHAVPNRMVHGYGLSPA
LVDELAALQPEVLVTVDHGIACHAGVAAAKARGWTVLVTDHHLPGEVLPPADAIVDPNLA
VDSFPSKSLAGVGVIFYVLLALRSALRARGAFADRAEPDLSVLLDLVAVGTVADLVPLDT
NNRALVSAGLRRLREGKGCIGLRALIDASGRDVARLSASDIGFALGPRLNAAGRLEDMAL
GIELLLSEDWSRAREIAATLEEINAERRAVQQLMTDDAEQAVTKVVLDADGALPIAACLF
DAEWHPGVIGLVASKLKDRLHRPVIALAPAEPGSSQLRGSARSIPGLHIRDVLAAVDARH
PGLLQKFGGHAMAAGLSMDHAALATFEQAFQAQVHAMVDASLLHAELHSDGELSAHELDH
VHAEALRVAGPWGQGFPEPLFDGEFEILQWRLLKERHLKLTLRCAGRAEPLNAIHFNGWR
GSEPARKVRLAYRLVSDDYRGGSAVQLIVEHCEPAAVTG
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgacctccactccccggatcgtccggcgtccgccagggcaggccggaagctggcccgac
gccatgttgccgctgctgcgccgcatctacgccgcgcgcggtgtccgcgatgcgcagggc
gcgcagccgcgactgggccagttgctctcgccggagttgctgcataacagcgacgtggcc
gccaacttgctggccgatgcgatcgcccagcaacggcgcatcctggtggtgggtgatttc
gattgcgatggcgccaccgcctgcgcggtgggcgtgcgcggtttgcgcatgctcggcgcg
ctggatgtgcaccacgccgtgcccaatcgcatggtgcacggctatggcctgtcgcctgcc
ttggtggacgagctggctgcgctgcaaccggaggtgctggtcaccgtcgatcacggcatc
gcctgccatgccggcgtggccgccgccaaggcgcgcggctggacggtgctggtcaccgac
caccatctaccaggcgaggtgctgccgccggccgatgcgatcgtcgacccgaacctggcg
gtcgacagctttcccagcaaatcgctggccggcgtcggcgtgattttttacgtattgctg
gcgctgcgcagtgcgctgcgcgcgcgcggcgcgtttgccgaccgcgccgagccggatctg
tcggtgttgctggatctggtcgccgtcggcacggtggccgatctggtgccgctggacacc
aataaccgcgcgctggtgtcggccgggttgcgtcggctgcgcgagggcaaaggctgcatc
ggattgcgcgccctgatcgatgccagcggccgcgatgtcgcgcgtctgagcgccagcgat
atcggcttcgcgctcgggccgcgcttgaatgcggccggccggctcgaagacatggcgttg
ggcatcgagttgttgctcagcgaagactggagccgggcgcgcgagatcgccgccacgctc
gaagagatcaatgccgagcgccgcgcggtgcagcagttgatgaccgacgatgccgagcag
gcggtgaccaaggtggtgctggatgccgatggcgccttgccgatcgccgcatgcctgttc
gatgcggaatggcaccccggcgtgatcggcttggtcgcctccaaattgaaagaccggttg
catcgtccggtgatcgcgctggccccggccgagccgggcagcagccagttgcgcggttcg
gcgcggtccattcccggcctgcatatccgcgacgtgctggcggcggtggatgcgcgtcat
cctggcttactgcagaagttcggcggccatgcgatggcggcgggcttgagcatggatcat
gctgcgctggccaccttcgagcaggcgtttcaggcgcaggtgcacgcgatggtggatgcg
tcgctgctgcatgccgagttgcacagcgatggcgagctgtccgcgcacgaactcgatcac
gtgcatgctgaagcgctgcgtgtggccggtccgtgggggcagggctttccagagccgctg
ttcgacggcgagttcgagatattgcaatggcgtctgctcaaggaacgccatctcaagctg
accttgcgttgcgccggccgcgccgagccgctcaatgccatccatttcaacggttggcgc
ggcagcgaaccggcacgcaaggtgcggctggcgtatcggttggtgagcgacgattaccgc
ggcggcagtgcggtgcagttgatcgtcgaacattgcgagccggcggcagtcactggctga
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