Xanthomonas dyei: NYR95_11070
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Entry
NYR95_11070 CDS
T09460
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy03420
Nucleotide excision repair
xdy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NYR95_11070
03430 Mismatch repair
NYR95_11070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xdy03400
]
NYR95_11070
Enzymes [BR:
xdy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NYR95_11070
DNA repair and recombination proteins [BR:
xdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NYR95_11070
MMR (mismatch excision repair)
Other MMR factors
NYR95_11070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_30
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
WOB56010
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Position
2566380..2568149
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AA seq
589 aa
AA seq
DB search
MSRRVDSPDTDADREIHACITATPPQPFVVRAGAGSGKTTSLIKALDWVMSEHGASMRAK
KQKVACITYTDLAANEILSDVNSSPLVHVSTIHSFYWAIAKTFQADIKIWLKSDIYRRIS
ELEEEFKNYSSRVRQTTRDRNKADQERYARNLEALDGIKTFNYGVGSDYAKGILGHEDIL
QLADFLLQNRPLFRRVVALNYPFVFIDESQDTFPNVVKSFKEVEAQMRGKFCLGFFGDPM
QSIFMRGAGEIPREDHWQAITKPENFRCAMQILDVANAVRAQGDGMEQVRGLHERVDGEL
KPVEGSARMFVLPNTLNRNETLARVRAWSAAANNDEGWTTPDLGVKILVIVHRMAASRLG
FGGIYSALNDKTSEAMKQGMQDGTGWPVRPFLNFVLPIVAAMNAGNEFAAMNLLREFSPR
LTPGALTGRRAAGVLRELRTAVLRLVAMLDEADTTIGDIAIHLRDSGLFDFDERYERVLE
FVGDIGDMAQEAEAADAATAKGLSSDAAILKFFRCAAQELRPYERYVSEGSPYATQHGVK
GAEFDRVVVVMDEEESDYRTYNYERVFASADARAADRARAQNGDENTWS
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcgagtcgatagcccggataccgatgcggaccgcgagatccacgcgtgcatt
acggcaacgccaccacagcccttcgtggttcgtgccggcgcaggttccggcaagaccacc
tccctcatcaaggcgctggactgggtgatgtctgagcacggcgccagcatgcgggcaaag
aagcagaaggttgcctgtatcacgtacacagacctcgccgcgaatgaaatcctgtcggac
gtcaactccagtccgctggttcatgtctcgacgatccatagcttctactgggccattgcc
aagacgtttcaggctgacatcaagatctggctgaagagcgacatctacaggcggatctct
gagctggaagaagagttcaagaactacagctcgcgcgttcggcaaaccacgcgtgacagg
aacaaggccgatcaggagcgctatgcccgaaacctggaagctctggatggcatcaagacg
ttcaattacggcgtcggcagtgattacgcgaagggcatcctcggccacgaggacatcctt
cagcttgcagacttcctactgcagaatcgcccactgtttcgaagggtcgtggcgttgaac
tacccgttcgtgttcattgacgagagtcaggacacattcccgaacgtggtcaagtccttc
aaggaagtggaagcccagatgcggggtaagttctgtctcggtttttttggcgacccgatg
cagtcgatcttcatgagaggcgctggggagattccgcgcgaagaccattggcaagccatc
accaagccggagaacttccgctgcgccatgcaaatcctggacgtcgccaacgccgtgcgc
gcgcagggcgacggcatggagcaagttcgcggactgcacgagagggtcgatggtgagctc
aaacccgtggagggctcggcccggatgttcgtcctgccgaacacgctgaaccgaaatgag
accctggcaagggtccgagcatggagcgcggcagcgaacaacgacgaagggtggactacc
ccagatcttggggtcaaaatccttgttatcgtgcaccgtatggccgcaagccggcttggc
tttggtggcatctactcggctctgaacgacaagacgtcggaggccatgaagcagggaatg
caggacggtaccggctggcctgttcggcccttcctcaatttcgtgttgccaatcgttgca
gcgatgaacgccggcaacgagttcgccgcgatgaatctgctccgggagttcagcccgcgc
ctgacgcctggcgccctgaccggccgccgtgctgcgggcgttttgcgtgagctgcgcaca
gccgttttaagactcgtcgccatgctggatgaggccgacaccactattggagacatagcc
atccatctccgcgactcgggcctattcgatttcgacgagcggtatgagcgagtgcttgag
ttcgtcggagacatcggtgacatggctcaagaagccgaggccgctgatgcagctactgcg
aagggactgtcctcggacgcggcaatactcaagttcttccggtgcgccgcacaagagctt
cggccatacgaacgatatgtctctgaaggctcgccctatgctacgcagcatggcgtgaaa
ggcgctgagttcgaccgcgtcgttgtggtgatggacgaggaagagagtgattatcgaacg
tacaactacgagcgggtctttgccagcgctgatgcccgtgcagcagatcgtgcacgagcc
cagaacggtgatgaaaatacctggagctga
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