Xanthomonas dyei: NYR95_11135
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Entry
NYR95_11135 CDS
T09460
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
xdy
Xanthomonas dyei
Pathway
xdy02020
Two-component system
xdy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NYR95_11135
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NYR95_11135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xdy03021
]
NYR95_11135
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
xdy02035
]
NYR95_11135
Transcription machinery [BR:
xdy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NYR95_11135
Bacterial motility proteins [BR:
xdy02035
]
Flagellar system
Flagellar assembly proteins
Stator
NYR95_11135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WOB56020
LinkDB
All DBs
Position
complement(2577863..2578630)
Genome browser
AA seq
255 aa
AA seq
DB search
MSTATATTASAQYRAVQRNNANDVVTQHADLVRRIAHHLAARLPASVEVDDLIQAGMIGL
IEASRSYDSDQGASFETYASIRIRGSMIDEIRRGDWVPRSVHRRARDAAAAVRKIEQNTG
RAAAATEVAAAMEMPLPDYLRLMEDAARGQVLSLESRIEDHGELDTTAKGGPNPQQMMER
GEFGRELGKAIGQLPEREQLVLSLYYEQELNLKEIGAVLGVSESRVCQIHGQAVVRLRGR
LKVFELADAGVEIDD
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgctaccgcaaccacggccagcgcgcagtaccgcgccgtgcagcgcaataac
gccaacgacgtggtgacccagcacgccgatctggtccgccgcatcgcccaccatctggcg
gcgcgtctgccggccagcgtggaagtggacgatttgatccaggccggcatgatcggcctg
atcgaagcctcgcgcagttacgactccgaccagggcgcctcgttcgaaacctacgcctcg
atccgtatccgcggctcgatgatcgacgaaattcgccgtggcgactgggtgccgcgttcg
gtgcaccgccgtgcccgcgacgccgccgccgccgtgcgcaagatcgagcagaacaccggc
cgcgccgccgccgccaccgaagtggccgccgcgatggaaatgccgctgcccgattacctg
cgcctgatggaagacgccgcacgcggccaggtgctgagcctggaatcgcgcatcgaagat
cacggcgagctggacaccaccgccaagggtggccccaacccgcagcagatgatggagcgt
ggcgaattcggccgcgagctgggcaaggccatcggccagttgcccgagcgcgagcagctg
gtgctgtcgctgtactacgaacaggaattgaacctgaaggaaatcggcgctgtgctcggt
gtcagcgagtcgcgcgtctgccagatccatggccaggccgtggtgcgtttgcgcggccgc
ctcaaagtcttcgaactggccgatgccggtgtcgaaattgacgactaa
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