Xanthomonas dyei: NYR95_12530
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Entry
NYR95_12530 CDS
T09460
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
xdy
Xanthomonas dyei
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xdy03009
]
NYR95_12530
Enzymes [BR:
xdy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
NYR95_12530
Ribosome biogenesis [BR:
xdy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NYR95_12530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
WOB52261
LinkDB
All DBs
Position
2875981..2877630
Genome browser
AA seq
549 aa
AA seq
DB search
MSDTPRKLSLNKLSLKRDSAPEVPKLEERLHKVLAQAGLGSRRALEQRIADGLIKVNGAV
AQTGMSVRSGDKIELDGRSFVASALTEPSRVLIYNKPEGEVTTREDPEGRPTVFESLPAL
KGSRWIAIGRLDINTTGLLLLTTDGELANAMMHPSYEVEREYVVRVRAPEGEENVSDAII
ERLSRGVLLEDGGAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRS
RYGKISLPRELLRGQSVEVAQEKVDTLRAELKLEEGAPSALTLQPVIGQRRAAKSTVHVS
RDGRSNAYVNGQTSGADEGRELRRFDNLREDRGGRGRGKPGGFKGGLTVSGEAAAKQSQQ
RPFKQRGPAKGDRSLPDGNPAAFRSWYVPDGVSTGPSGHRNAGPSGPGTGQARPYAKKGP
GGARPGAGGPGPGNARPGARGPGRDGAGGGQGQSQGQGQGQRKHPYGHPGNAPSFPSDHA
NPGFSPYGTARPAGRPTGARAGGPGGNRGPGGNRGPGGPGGAPRGAGGPGGRPPGGGNRR
PPGGGNRGR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccccccgcaagctgtcgttgaacaagctttccctcaagcgcgacagcgcg
cccgaagtgccgaagctggaagagcgcctgcacaaggtgctggcccaggccggtctgggc
tcgcgccgcgcgctcgagcagcgcattgccgatggcctgatcaaggtcaatggcgccgtc
gcgcagaccggtatgtcggtgcgcagcggcgacaagatcgagctggacggccgcagtttc
gtggccagcgcgctgaccgagccctcgcgcgtgctgatctacaacaagcccgaaggcgaa
gtgaccacgcgcgaagatcccgaaggccgcccgaccgtgttcgagtcgctgccggcattg
aagggctcgcgctggatcgccatcggccgcctggacatcaacaccaccggcctgctgctg
ctgaccaccgacggtgagctggccaacgcgatgatgcacccctcttacgaggtcgaacgc
gaatacgtggtgcgcgtgcgcgccccggaaggcgaagaaaacgtgtccgacgccatcatc
gaacggctgtcgcgcggtgtgctgctggaagacggcggcgccaagttcgacgagatcgag
cgcatcggcggcaccgattcgcacgactggttccgcgtggtggtcaaggaaggccgcaac
cgtgaagtgcgccgtctgtgggaatcgcagggctgccaggtcagtcgcctcaagcgcagc
cgctacggcaagatctcgctgccgcgcgaactgctgcgtgggcagtcggtggaagtggca
caggaaaaggtcgacaccctgcgcgccgagctcaagctggaagaaggcgcgccttctgca
ctgaccctgcaaccggtgatcggccagcggcgtgctgccaagtccaccgtgcatgtctcg
cgcgatggtcgcagcaatgcctacgtcaatgggcagacctccggtgccgatgaaggtcgc
gagctgcgtcgcttcgacaacctgcgcgaagaccgcggcggccgtggtcgcggcaagccg
ggcggcttcaagggcggcctcaccgtcagcggcgaagcggcggccaagcaatcgcagcaa
cgcccgttcaaacagcgtggcccggccaagggcgaccgctcgttgcccgatggcaacccg
gccgcgttccgcagctggtacgtgcccgatggcgtgagcaccggcccgagcggtcaccgc
aatgccggccccagcggtccaggcaccggtcaggcgcgtccttatgccaagaaaggtccg
ggtggtgcgcgtccaggcgccggcggcccaggcccaggcaatgcacgtcccggtgctcgc
gggccagggcgtgacggtgccggtggcggacagggccagtcgcaaggtcagggacaaggc
cagcgcaagcacccgtatggacatccgggcaatgcaccgagcttcccgtccgatcacgcc
aacccgggcttcagcccctatggcacggcgcgtccggcaggtcgcccgaccggcgcacgc
gcaggcggccccggtggtaaccgtggtcctggcggcaatcgcggtcccggtggtccgggt
ggcgcaccgcgcggtgccggcggtcccggtgggcgcccgccgggcggcggcaatcgtcgc
ccgcccggtggcggtaatcgcggtcgctaa
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