Xanthomonas dyei: NYR95_12845
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Entry
NYR95_12845 CDS
T09460
Name
(GenBank) glycosyl hydrolase family 28 protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy00040
Pentose and glucuronate interconversions
xdy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NYR95_12845
Enzymes [BR:
xdy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
NYR95_12845
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
DUF7304
Motif
Other DBs
NCBI-ProteinID:
WOB52317
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All DBs
Position
2936281..2937951
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AA seq
556 aa
AA seq
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MQATFPFPAIAPLTLALFGMTTFQAGAARPHGQDVPDTAHSISTGWGVVQQPSLPTQICA
TLKAALVPVAGSLDTLDPDPTHSKRDTARLQAAIDDCPAGSAVHLIPGDAGESGLLSGPL
TIKSGVTLWIDRGVTLFGSRNPQDYDNGLGTCGTATSDKAKSCNPLIYISDAAKSAIVGA
GKIDGRGGSTLTAGPNAGKASWWDLAYLNVTQGLSQHVPRLLQIDNSTDVTLYDITLENS
PNFHVISDNVVGLTAWGIKILAPSLVYSRLGYQCPAGSTPDVNPHATCFTPETAKNTDGF
DPGQSKNVLLAYSYIGTGDDGVAIKAHANSKRSISSENMLFAYNQFYYTHGFSLGSETDS
GMRHIAVRGLSIDGFNANDVQRDPYSANGLRIKSDASRGGQVYDISFENICMRGVARPLV
FDANYANPATRDKLPQFNGIALSNVHSLGSTTLGAGELSFYGYRDASTTLPITISLDNVV
LEGGKVSFAQPHFGGPASNPGATHFTFKGGPVSFYDQLTESVPNDVQLQGKPGPGAPLQC
NDAFIAYHSVLPDSPI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctacctttccctttccagccatcgcgccgctcaccctcgccttgttcggcatg
acgaccttccaggccggcgcggcgcgaccgcatggacaggatgtgcccgacaccgcgcac
agcatctccactggttggggcgtggtccagcagccgagcttgccgacgcagatctgcgcc
acgctcaaggcggcgctggtacctgtggccggttcgctggacacgctggatcccgatccc
acccactccaagcgcgataccgcacgcctgcaggcggccatcgacgattgtcctgccggc
agcgccgtgcatctgatccccggcgatgccggcgagtccggcctgctcagcgggcctctg
accatcaagagtggagtcacgttgtggatcgaccgcggcgtcaccctattcggctcgcgt
aatccgcaggactacgacaacggcctgggcacctgcggcaccgccaccagcgacaaggcc
aagtcgtgcaatccgctgatctacatctccgatgcggccaagagcgccatcgtcggtgcg
ggcaagatcgacggccgcggcggcagcacgctcactgccgggcccaatgccggcaaggcc
agctggtgggatcttgcgtacctcaacgttactcaaggattgagtcagcatgtgccgcgt
ctgctgcagatcgacaacagcaccgacgtcaccttgtacgacatcaccctggaaaactcg
cccaatttccatgtcatcagcgacaacgtggtgggcctgaccgcgtggggcatcaagatc
ctggcacccagcctggtctattcgcgtctcggctaccaatgcccggcaggcagcaccccg
gacgtcaatccgcacgctacctgctttacgccggaaaccgccaaaaacaccgacggtttc
gaccccggtcagtcgaagaatgtgctactggcgtactcgtacatcggcaccggcgatgac
ggcgtggcgatcaaggcgcatgccaacagcaagcgcagcatttcctcggaaaacatgctg
ttcgcctacaaccagttctactacacccacgggttctcgctcggcagcgaaaccgattcg
ggcatgcgccatatcgccgtgcgcgggttgagcatcgatggcttcaacgccaacgatgta
cagcgcgatccctactcggccaatggcctgcgcatcaagtccgatgcctcacgtggcggc
caggtctacgacatcagcttcgagaacatctgcatgcgcggcgttgcgcggccgctggtg
ttcgacgccaactacgccaacccggccacccgcgacaagctcccgcagttcaacggcatt
gcgctcagcaacgtgcattcgctgggttcgaccacgttgggcgccggcgaactgagtttc
tatgggtatcgcgatgccagcaccaccctgccgatcaccatctcgctggacaatgtcgtg
ctggaaggcggcaaggtcagcttcgcacagccgcatttcggcgggcctgcgagcaacccg
ggcgcgacgcacttcactttcaagggcggcccggtgagcttttacgatcagctgacggag
tcggtgcccaacgatgtgcagctacaaggaaaacctggcccgggcgcgccactgcaatgc
aatgacgcctttattgcctatcactcggtgctgccggattcgccgatctga
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