Xanthomonas dyei: NYR95_14410
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Entry
NYR95_14410 CDS
T09460
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
xdy
Xanthomonas dyei
Pathway
xdy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NYR95_14410 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xdy03400
]
NYR95_14410 (uvrB)
DNA repair and recombination proteins [BR:
xdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NYR95_14410 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NYR95_14410 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Cytokin_check_N
Motif
Other DBs
NCBI-ProteinID:
WOB52592
LinkDB
All DBs
Position
complement(3286913..3288934)
Genome browser
AA seq
673 aa
AA seq
DB search
MTDRFELVSPYSPAGDQPAAIDKLVANFEAGLAKQTLLGVTGSGKTYTIANVVQQVQKPT
LVMAPNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLSATKTLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSVGEHIDQRQLIRHLTDLQ
YTRNEFELTRGAFRVRGEVLDVFPAESDTEALRIELFDGDIEQLTLFDPLTGETLRKLQR
YTVYPKTHYATTRERTLSAVDTIKDELKERLEQLYSQNKLVEAQRLAQRTQFDLEMMAEV
GFCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMYKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYELRESAGEITELVVRPTGLID
PIVEIRPVGTQVDDLMSEVHERIKLGDRVLVTTLTKRMAENLTEYLSEHGIRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNLRGKAILYADKMTRSMKAAIDETDRRREKQVEYNLEHGITPKSVARPISDIMEGA
REDAAEKRAGKGRSKSRQVAEETPDYRAMKPAEIAGKLKSLEQKMYQHAKDLEFEAAAQM
RDQIQKLNAASLG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgttttgagctcgtgtccccgtactctccggctggcgaccagccggcggcc
atcgacaagctggtggccaacttcgaggctggcctggccaagcagaccctgctgggggtg
accggttcgggcaagacctataccatcgccaatgtcgtgcagcaggtgcaaaagcccacc
ttggtgatggcgccgaacaagacgttggcggcgcagctgtatggggagttcaagtcgttc
ttccccaacaatgccgtcgaatacttcgtcagctattacgactactaccagcccgaagcc
tacgtgccgtcgtcggataccttcatcgagaaggacagttcgatcaacgagcacatcgag
cagatgcgtctatcggcgacgaagaccttgctgtcgcggcgcgattcgctggtggttgcc
acggtatcggcgatctacggcctgggcgcgccggaggactatctgtcgctgcgcctgatc
ctgtcggtgggcgagcacatcgatcaacgtcagttgatccgccatctcaccgatctgcag
tacacccgcaacgaattcgagctcacacgcggcgcgttccgtgtgcgtggcgaggtgctg
gatgtgttcccggcggagtcggacaccgaagccttgcgcatcgaattattcgacggcgac
atcgagcagctgaccttgttcgacccgttgaccggcgaaaccctgcgcaagctgcagcgt
tacaccgtgtatcccaagacccattacgccaccacgcgtgagcgcacgctcagtgcggtc
gacacgatcaaggacgaactgaaggagcggctggagcagttgtattcgcagaacaaattg
gtcgaagcgcagcgtctggcgcagcgcacccagttcgatctggaaatgatggccgaagtg
ggtttctgcaacggcatcgagaactactcgcggcatctcaccggcaaagcgccaggcgag
ccgccaccgacactattcgactacctgccaccggatgcgctactggtgatcgatgagtcg
cacgtgaccattccgcagatcggtgcgatgtacaagggcgaccgttcgcgcaaggaaacg
ttggtggaattcggcttccgcctgccgtcggcgctcgacaaccggccgttacgcttcgaa
gagtgggaggcgcgttcgccgcgcagcatctatgtgtccgcgacgcctggtccttacgag
ttgcgcgagtctgccggcgaaatcaccgagctggtggtgcgtcccacggggttgatcgat
ccgatcgtggagatacgcccggtcggcacgcaggtcgacgacctgatgtccgaagtgcac
gagcgcatcaagctcggcgatcgcgtgttggtcacaacgctgaccaagcgcatggccgag
aacctgaccgagtacctgagtgagcacggcattcgcgtgcgctacttacactcggatatc
gacacagtcgagcgcgtggagatcattcgcgacctgcgtttgggcaagttcgatgtgctg
gtcggcatcaacctgctgcgcgagggtctggacatgccggaagtgtcgttggtggcgatt
ctggatgcggacaaggaaggcttcctgcggtcgaccggctcgttgatccagaccatcggt
cgtgccgcacgcaatctgcgcggcaaggcaattttgtatgccgacaagatgacgcgctcg
atgaaggctgcgatcgacgagaccgatcgacgtcgcgagaaacaagtggagtacaacctc
gaacacggcatcacgccgaagtcggtggcgcgcccgatctccgacatcatggagggcgcg
cgcgaggatgcggccgaaaaacgtgccggcaaggggcggtcgaagtcgcgtcaggttgcc
gaagagacacccgactatcgtgcgatgaagcctgcggaaattgccggcaagctcaagagc
ctggagcaaaagatgtaccagcacgccaaggatctggagttcgaggcagcggcgcagatg
cgcgaccagatccagaagttgaatgcggcaagcctggggtag
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integrated database retrieval system
