Xanthomonas dyei: NYR95_14515
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Entry
NYR95_14515 CDS
T09460
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NYR95_14515 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xdy03019
]
NYR95_14515 (pnp)
03016 Transfer RNA biogenesis [BR:
xdy03016
]
NYR95_14515 (pnp)
Enzymes [BR:
xdy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NYR95_14515 (pnp)
Messenger RNA biogenesis [BR:
xdy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NYR95_14515 (pnp)
Transfer RNA biogenesis [BR:
xdy03016
]
Prokaryotic type
tRNA degradation factors
NYR95_14515 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
S1_TP0910
DUF7680
KH-I_KHDC4-BBP
OB_PDCD11
KH_KhpA-B
S1_2
KH_PNO1_2nd
BAG6
AATF-Che1
Motif
Other DBs
NCBI-ProteinID:
WOB52612
LinkDB
All DBs
Position
complement(3309745..3311859)
Genome browser
AA seq
704 aa
AA seq
DB search
MAKITKTFQYGKHTVTLETGEVARQASGAVIVKMDDTVLLVTAVAAKTAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYKNEVQIIATVMSMN
PDIDGDIAALIGASAALSLAGTPFNGPIGAAKVGYKNGEYILNPTIAELKDSQLELVVAG
TANAVLMVESEAELLSEEVMLGAVTFGHRELQKVINAINELTVEAGTKPSTWVAPAKNTA
LINALKEAVGTQLASAFQVRDKLQRRDAISAIKKDVMESLAGRVASEGWSTAELSKEFGE
LEYHTMRDSVLDTKVRIDGRALDTVRPIAVQAGVLPRTHGSALFTRGETQAIVVTTLGTA
RDGQVIDAVSGEYKENFLFHYNFPPYSVGECGRFGAPKRREIGHGRLAKRGVLAVMPSLE
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKENDRFVVLS
DILGDEDHLGDMDFKVAGTAEGVSALQMDIKIEGITEEIMKQALQQAKAGRLHILGEMAH
ALTTPRLELSDYAPRLLTIKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIIIAS
VNAIAAQAAKSRIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSERV
EKVGDKLKEGDLVRVKVLEVDKQGRIRLSIKAVEEGEGVPPSAE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaatcaccaaaaccttccagtacggcaagcacaccgtcaccctggagacgggc
gaagtcgctcgccaggcgagcggtgccgtcatcgtcaagatggacgacaccgtactgctg
gtcaccgccgtcgccgcaaaaaccgcgcgcgaagggcaggacttcttccccctgacggtc
gattatcaggagaagttctatgccggcggccgcatcccgggcggcttcttcaagcgcgaa
ggacgtgcgaccgagaaggaaacgttgatctcgcgcctgatcgaccgtccgatccgtccg
ctgttcccggaggactacaagaacgaagtacagatcatcgcgaccgtgatgtcgatgaac
ccggacatcgacggcgatatcgccgcgctgatcggtgcatcggctgcactgtcgctggcc
ggtacccccttcaacggcccgatcggcgccgccaaggtgggctacaagaacggtgagtac
atcctcaacccgaccatcgccgagctgaaggattcgcagctggagctggtggttgccggt
accgccaatgcggtgctgatggtggagtcggaagccgagctgttgtccgaagaagtgatg
ctgggcgcagtgaccttcggtcatcgcgaactgcagaaagtcatcaacgcgatcaacgag
ctgaccgtcgaagccggcaccaagcccagcacctgggttgcgcctgccaagaacaccgcg
ctgatcaacgcgctgaaggaagccgttggcacgcagctggcgagcgccttccaggtgcgc
gacaagctgcagcgtcgcgacgccatttcggcgatcaaaaaagacgtgatggaatcgctg
gccggccgcgtcgcctccgagggctggagcaccgccgagctgtcgaaggaattcggcgag
ctggaataccacaccatgcgcgactcggtgctcgacaccaaggtgcgtatcgatggtcgt
gcgctggataccgtgcgtccgatcgcggtgcaggccggcgtgttgccgcgtacccacggc
tctgcgctgttcacccgcggcgagacgcaggcgatcgtggtcaccacgctgggcactgct
cgcgatggccaggtgatcgacgcggtcagcggcgagtacaaagaaaacttcctgttccat
tacaactttcctccgtattcggtgggcgagtgcggtcggttcggtgcgccgaagcgtcgc
gaaatcggtcatggccgtctggccaagcgtggcgtgctcgccgtgatgccgagcctggaa
gaattcccgtacaccatccgcgtggtctcggaaatcaccgagtccaatggttcctcgtcg
atggcatcggtctgcggcagctcgctggcgctgatggatgcgggcgtgccgatcaaggcg
ccggtcgcgggcatcgccatgggcctggtcaaggaaaacgaccgcttcgtggtgctgtcg
gacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtggccggtactgcc
gaaggcgtgtccgcgttgcagatggacatcaagatcgaaggcatcaccgaagagatcatg
aagcaggcattgcagcaggccaaggccggccgtctgcatatcctcggcgagatggcgcac
gcactgaccaccccgcgtctggaactgagcgactacgcgccgcgtctgctgaccatcaag
atccatccggacaagatccgcgaagtgatcggcaagggtggttcgaccatccaggcgatc
accaaggaaaccggtacgcagatcgacatccaggacgacggcacgatcatcatcgcctcg
gtcaacgccatcgctgcgcaagctgcgaagtcgcgcatcgagcagatcacctcggacgtg
gagccgggccgtatctacgaaggcaaggtcgccaagatcatggacttcggtgcgttcgtc
accatcctgccgggcaaggacggcctggtgcacgtctcgcagatttccagcgagcgcgtg
gagaaggtcggcgacaagctgaaggaaggcgatctggtccgcgtgaaggtactggaagtg
gacaagcagggccgtatccgtctgtcgatcaaggcagtggaagaaggcgagggcgtcccg
ccgtcggccgagtaa
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