Xanthomonas dyei: NYR95_15075
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Entry
NYR95_15075 CDS
T09460
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy03030
DNA replication
xdy03430
Mismatch repair
xdy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NYR95_15075 (holA)
03430 Mismatch repair
NYR95_15075 (holA)
03440 Homologous recombination
NYR95_15075 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xdy03032
]
NYR95_15075 (holA)
03400 DNA repair and recombination proteins [BR:
xdy03400
]
NYR95_15075 (holA)
Enzymes [BR:
xdy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NYR95_15075 (holA)
DNA replication proteins [BR:
xdy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NYR95_15075 (holA)
DNA repair and recombination proteins [BR:
xdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NYR95_15075 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
WOB52711
LinkDB
All DBs
Position
complement(3435714..3436742)
Genome browser
AA seq
342 aa
AA seq
DB search
MELRPEQLAGQSNQPLQPAYLIAGPETLRVLEAADAVRARARAEGIGEREVFDADGREFD
WNQLDASFNAPSLFSPRRLVEVRLPSGKPGKDGAEVITRFCANPPPDVVLLITANDWSKA
HQGKWAEAIGRIGTIAVAWAIKPHELSDWIERRLRAQGLRADAAAVQRLAERVEGNLLAA
AQEIDKLALLADGKTLDLEAMESLVADAARYDVFRLAETTFSGQPAAVIRMLAGLRAEGE
AVAALMPILIKELLRTAALAKVQANGGNLAAEMKSQGIWESRQAPFKRALQRHPEPRRWE
RFVAEAGLVDRMAKGRADGDAWVGLERLLIAVAEARAVRLLA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcgcccggaacagctggccggccagtccaatcagccgttgcagccggcctac
ctgatcgccggcccggaaaccttgcgcgtgctcgaagcggccgatgcggtgcgcgcacgt
gcgcgcgccgagggcatcggcgagcgcgaggtgttcgatgccgacggccgcgagttcgac
tggaaccagctcgacgccagcttcaacgcgcccagcctgttcagcccgcgccgcctggtg
gaagtgcgcctgcccagcggcaagccgggcaaggacggcgccgaggtcatcacccgcttc
tgcgccaacccgccgccggatgtggtgctgctgatcaccgccaacgactggagcaaggcg
caccagggcaagtgggccgaggcgatcggccgcatcggcaccattgccgtggcctgggcg
atcaagccgcatgaattgtccgactggatcgagcgccgcctgcgcgcccagggcctgcgc
gccgacgcagccgcggtgcagcgcctggccgagcgggtggaaggcaacctgctggccgcc
gcgcaggagatcgacaagctggccttgctggccgacggcaagacgctggatctggaggcg
atggaatcgctggtggccgatgccgcgcgttacgacgtgttccgcctggctgaaaccacc
ttctccggccagcccgccgcggtgatccgcatgctcgccgggctgcgtgccgaaggcgaa
gccgtcgccgcgctgatgccgatcctgatcaaggaactgctgcgcaccgctgcactggca
aaggtgcaggccaacggcggcaacctggccgcggaaatgaaatcgcagggcatctgggaa
tcccgccaggccccgttcaagcgcgcactgcagcgccaccccgagccgcgccgttgggaa
cgcttcgtcgccgaagccggcctggtcgaccgcatggccaagggccgcgccgacggcgat
gcctgggttggcctggaacgcctgctgatcgcggtggccgaagcgcgcgcggtgagattg
ctggcgtga
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