Xanthomonas dyei: NYR95_15240
Help
Entry
NYR95_15240 CDS
T09460
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NYR95_15240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xdy03000
]
NYR95_15240
03400 DNA repair and recombination proteins [BR:
xdy03400
]
NYR95_15240
Enzymes [BR:
xdy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NYR95_15240
Transcription factors [BR:
xdy03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NYR95_15240
DNA repair and recombination proteins [BR:
xdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NYR95_15240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HTH_Tnp_ISL3
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WOB52740
LinkDB
All DBs
Position
3471504..3472967
Genome browser
AA seq
487 aa
AA seq
DB search
MQTLTPDRIQCDRARLARDARFDGLFFTAVRSTGIYCRPVCPAPAPKPSNVSYYPSAAAA
SAAGYRPCLRCRPELSPQAQQHLGEESVQRALAMIAEGLLHEQPVQTLADAVGVSARQLQ
RQFVQQLGATPIQVHGTHRLLLAKQLLTETALPVTQVALAAGFNSLRRFNAAFLQGCGMP
PSALRKQRTEVPGGQLCLRLGYRPPLDWAAMLGFLQRRAIPGIEQVDASGYRRVIGTPGN
ASLIEVTAAPQRAELLLYIGATDPRQIPQIVRRVRRLFDLDADLQAVHATLESEPRLAEA
IQRRPGLRVPGGWDGFEVAVRAVLGQQISVAGAATLAARLVDRHGGHHADMPPGLDRSFP
TPEQLADAPLEQLGLPRARAATLRALASACAQGRLHFGAGQRLPDFVAACTALPGIGPWT
AHYIAMRALSHPDAFPAGDLILQQVLGAPERLSERATEARSQAWRPWRAYAVLHLWHLAV
DRKDTRP
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgttgacgcccgatcgaatccaatgcgaccgcgcccggctggcgcgcgatgcg
cgcttcgacggactgtttttcactgcggtgcgcagcaccggcatttactgccggccggtg
tgtccggcaccggcgcccaagccaagcaatgtcagttattacccgagcgcggcggcagcc
agtgcggccggctaccggccgtgtctgcgctgtcgtccggagctgtcgccgcaggcgcag
caacatctgggcgaagaaagcgtgcagcgtgcgctggcgatgattgccgaaggcctgctg
catgagcagccggtgcagacgctggccgatgcggtgggggtgagtgcgcggcagctgcaa
cgacagttcgtgcagcagcttggcgccaccccgatccaggtgcacggcacgcaccggtta
ctgcttgccaagcagttgctcaccgaaaccgcgttacctgtcacccaggtcgcactcgcc
gccggcttcaacagcctgcggcgtttcaacgctgcgtttctgcagggctgcggcatgccg
ccgtccgcgctacgcaagcagcgcaccgaagtaccaggcggccaattgtgtctgcgtctg
gggtatcgcccgccgctggattgggcggcgatgctgggctttttgcagcgccgcgcgatt
ccggggatcgagcaggtcgatgccagcggttaccggcgcgtgatcggcacgcctggaaac
gccagcttgatcgaggtgaccgccgcgccgcagcgggccgagctgctgctgtacatcggg
gcgaccgacccgcgccagattccgcagatcgtgcgtcgcgtgcgccgcttattcgatctg
gatgcggacctgcaggccgtccatgccacgcttgaatccgaaccgcgcttggccgaggcg
atccagcgccggcccggcctgcgcgtaccggggggatgggatggttttgaagtggcggtg
cgcgcggtgctgggccagcagatcagcgtggccggtgccgcaacgctggcggcgcggttg
gtggaccgccacggcggccatcatgccgatatgccgcctgggctggaccgcagtttcccc
acgcccgaacagctggccgacgcgccactggaacagctcgggctaccacgcgcacgtgcg
gccacgctacgcgcactggcatcggcctgcgcacaaggccggctgcatttcggcgccggc
cagcgcctgccggacttcgttgccgcctgcaccgcgctgcccgggatcgggccttggaca
gcgcattacatcgcgatgcgcgcgctctcgcatccggatgcgtttccggccggcgatctg
atcctgcagcaggttctgggcgcgccggaacgtttaagcgaacgggccaccgaggcacgt
tcgcaggcatggcgcccatggcgcgcgtatgccgtgttgcacctgtggcatctcgccgtc
gatcgcaaggacacccgcccatga
DBGET
integrated database retrieval system
