Xanthomonas dyei: NYR95_16480
Help
Entry
NYR95_16480 CDS
T09460
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NYR95_16480 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xdy03019
]
NYR95_16480 (recQ)
03400 DNA repair and recombination proteins [BR:
xdy03400
]
NYR95_16480 (recQ)
Enzymes [BR:
xdy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NYR95_16480 (recQ)
Messenger RNA biogenesis [BR:
xdy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NYR95_16480 (recQ)
DNA repair and recombination proteins [BR:
xdy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NYR95_16480 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
WOB52952
LinkDB
All DBs
Position
3776912..3778708
Genome browser
AA seq
598 aa
AA seq
DB search
MSSPAHELLSRVFGYDDFRGPQQAIVEHVAAGNDALVLMPTGGGKSLCYQVPALLRDGIG
IVVSPLIALMQDQVEALRQLGVRAEFLNSTLDAENAQRVERALLSGDLDLLYVAPERLLT
QRFLSLLERSRIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPHIPRMALTATADPPT
QREIAERLDLVDARHFVSSFDRPNIRYTVVQKDNARKQLQEFLTRYRGCAGIVYAMSRRK
VEETAQQLCAQGFNALPYHAGLPAEVRAENQRRFLREDGIIMAATIAFGMGIDKPDVRFV
AHVDLPKSLEGYYQETGRAGRDGDPAEAWLCYGLGDVVLLKQMIEQGEAAEERKRLERAK
LDHLLGYCESMQCRRQVLLAGFGETYPKPCGNCDNCLTPAAAWDATVASQKALSCVYRSG
QRFGVGHLIDILRGSENERIKQLGHDQLSTYGIGRDLDERTWRGVFRQLVAASLLEVDSE
GHGGLRLTDASRQVLKGERQVMMRRENPAAGRERGAQRTGLPVQPQDLVLFNALRGLRAE
LAKEQNVPAFVIFHDSTLRNIAEQRPTSIDALSRVGGIGGGKLARYGAQLIDIVREQG
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgcccgcccacgaactgctcagccgcgtcttcggttacgacgacttccgcggc
ccgcaacaagccattgtcgaacacgtcgctgccggcaacgacgccctggtactgatgccc
accggcggcggcaagtcgctgtgctaccaggtgccagcgctgttgcgcgatggcatcggc
atcgtggtgtcgccattgatcgcgctgatgcaggaccaggtcgaagccctgcgccagctc
ggcgtgcgcgccgaattcctcaattccacgctggatgcagaaaacgcgcaacgggtcgaa
cgcgccctgctgtcaggcgatctggatctgctctacgtcgcaccggagcgcctgttgacc
cagcgcttcctgtcgttgctggagcgcagccgcatcgcgctgttcgccatcgacgaagcg
cattgcgtgtcccaatggggccacgacttccgcccggaataccgtcagctcaccgtgctg
cacgagcgctggccgcacatcccgcgcatggccttgaccgccaccgccgacccgcccacc
cagcgcgagatcgccgagcgtctggatctggtggacgcacgccacttcgtcagctcgttc
gaccgccccaacatccgttacaccgtggtgcagaaggacaacgcgcgcaagcagctgcag
gagttcctcacccgttatcgcggctgcgccggcatcgtctatgcgatgtcgcggcgcaag
gtcgaagaaaccgcccagcagctgtgtgcgcaaggcttcaatgccctgccctatcacgcc
ggcctgccggccgaggtgcgcgcagaaaaccagcgtcgcttcctgcgcgaggacggcatc
atcatggccgccaccatcgccttcggcatgggtatcgacaagccggacgtgcgcttcgtc
gcgcatgtggacctgcccaaatcgctggaaggctactaccaggaaaccggccgcgccggc
cgcgatggcgacccggccgaagcctggctctgctacggcctgggcgatgtggtgctgctc
aagcagatgatcgaacagggcgaagcagccgaagagcgcaagcgcctggaacgcgccaag
ctcgatcacctgctcggttactgcgaatccatgcagtgccgccgccaggtactgctggcc
ggcttcggcgagacctatcccaaaccctgcggtaattgcgacaactgcctgaccccggcg
gccgcctgggatgccacggtggcctcgcaaaaggccttgagttgcgtctaccgcagcggc
cagcgcttcggtgtgggtcatctgatcgacatcctgcgcggcagcgagaacgagcgcatc
aaacagctcggccacgatcaactgagcacctacggcatcggccgcgacctggacgagcgc
acctggcgcggcgtgttccgccagctggtggccgccagcctgctggaagtcgacagcgag
ggccacggcggcctgcgcctgaccgacgccagccgccaggtcctcaagggcgagcgtcag
gtaatgatgcgacgcgagaatccggccgccggacgggagcgcggcgcgcagcgcaccggc
ttgccggtgcagccgcaggacctggtgttgttcaacgccttgcgcgggctgcgcgcggag
ctggccaaggaacagaacgtgccggcgttcgtgatcttccatgacagcacattgcgcaat
atcgccgagcagcggccgaccagcatcgatgcgttgtcgcgcgtgggcggcattggtggc
ggcaaactggcccgctatggcgcgcagctgatcgacatcgtgcgcgagcagggctga
DBGET
integrated database retrieval system
