Xanthomonas dyei: NYR95_17035
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Entry
NYR95_17035 CDS
T09460
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
xdy
Xanthomonas dyei
Pathway
xdy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NYR95_17035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xdy02022
]
NYR95_17035
02035 Bacterial motility proteins [BR:
xdy02035
]
NYR95_17035
Two-component system [BR:
xdy02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
NYR95_17035
Bacterial motility proteins [BR:
xdy02035
]
Pilus system
Twitching motility proteins
NYR95_17035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
Mg_chelatase
Pre_tape_measure
CR_prot_dom_plant
AAA_22
HTH_30
Motif
Other DBs
NCBI-ProteinID:
WOB56282
LinkDB
All DBs
Position
3911741..3913135
Genome browser
AA seq
464 aa
AA seq
DB search
MSEPKSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCLTDMRLPD
GNGIELVTEIAKHYPQTPVAMITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHAL
ELNNRDRPAPPAPPPEQASRLLGDSTAMESLRATIGKVARSQAPVYIVGESGVGKELVAR
TIHEQGARAAGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKPGLFQAAHGGTLFLD
EVAELPLQMQVKLLRAIQEKSVRPVGASGETLVDVRILSATHKDLGDLVSDGRFRHDLYY
RINVIELRVPPLRERSGDLPQLAAAIIARLARSHGRPIPLLTQSALDALNTYGFPGNVRE
LENILERALALAEDDQISATDLRLPAHGGHRLAATPGSAAVEPREAVVDIDPASSALPSY
IEQLERAAIQKALEENRWNKTKTAAQLGITFRALRYKLKKLGME
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccaaaagtgccctggttgtcgatgacgagcgtgatatccgcgagttgctt
gttctcaccctgggccgcatgggcctgcgcatcagcaccgccgccaacctggccgaagcg
cgcgagctgctggccagcaacccctacgacctgtgcctgaccgacatgcggctgcccgac
ggcaacggcatcgaactggttaccgaaatcgcaaagcactatccgcaaacgccggtcgcc
atgatcaccgcgttcggcagcatggatctggcggtggaggccttgaaggccggcgccttc
gacttcgtcagcaagccggtggacatcagtgtgctgcgcggcctggtaaagcacgcgctg
gaactgaacaaccgcgaccgccctgcaccgcccgcgccgccgcccgaacaagccagccgt
ctgctcggcgattcgaccgcaatggagagcctgcgcgccaccatcggcaaggtcgcgcgc
agccaggcgccggtgtatatcgtcggcgaatccggcgtgggcaaggagctggtggcacgc
accatccacgagcaaggcgcccgcgccgccggcccgttcgtgccggtgaactgcggcgcc
atccccgccgaactgatggaaagcgagttcttcggccacaaaaagggcagcttcaccggg
gcgcatgccgacaaacccggcctgttccaggccgcgcacggcggcacgctgtttctggac
gaagtggccgagctgccgctgcagatgcaggtcaaattgctgcgcgcgatccaggaaaaa
tcggtgcgcccggtcggcgcctccggcgaaacgctggtggacgtgcgcatcctctcggcc
acgcacaaggacctgggcgacctggtctccgacggccgcttccggcatgacctttactac
cgcatcaacgtgatcgaactgcgcgtgccgccgctgcgcgagcgcagtggcgacctgccg
caactggccgccgccatcatcgcgcgcctggcgcgcagccacggccggccgattccactg
ctgacccaatcagccctggacgcgctgaatacttacggctttccgggcaacgtccgcgag
ctggaaaacatcctcgaacgcgccctggccctggccgaagacgaccagatcagcgccacc
gacctgcgcctacccgctcacggcggccaccgcctagccgcgacgcccggcagcgcagcg
gtcgaaccgcgcgaagccgtggtggatatcgaccccgcgtcgtccgccctgccctcctac
atcgagcagctcgagcgcgccgcgatccagaaggcactggaagaaaaccgctggaacaag
accaaaaccgccgcgcagctgggcattacctttcgggcgctgcgttacaagctcaagaag
ttggggatggagtag
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