Xanthomonas dyei: NYR95_18525
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Entry
NYR95_18525 CDS
T09460
Name
(GenBank) polysaccharide lyase family protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
xdy
Xanthomonas dyei
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NYR95_18525
Enzymes [BR:
xdy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
NYR95_18525
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Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
PapC_N
Motif
Other DBs
NCBI-ProteinID:
WOB53304
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Position
4279128..4280729
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AA seq
533 aa
AA seq
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MLHSTLRMLACALCLYGGVSAPAMAAFGFTRSGDRLVVDTGAELVFSVNANNGDIVSMRY
RDNELQTTESKGSHIASGLGSASVDARLVDGAIVVSAKAGDLTQYYIARKGRNAIYMATY
APTLLPVGELRFVARLNVAKLPTAQQEPDSNVGTMVESEDVFLLPDGRTSSKFYSARRMI
DDQVHGVSGAGVAVFMLMGNRERSSGGPFFKDIATQKTSVTHELYNYMYSDHTQTEAFRG
GLHGVYGLLFTDGGAPSSAQLSTDFVDATLGVSGYLADSGRGAVSGRVSGVLSGQPAVIG
LRNDQTQYWATANGSGDYQVTGVRPGRYRMTLYQNELEVAQRDVEVFANATAQAALQAVV
LPGTLKWQIGVPDGTPAGFRHADLLPRAHPSDTRMRWAPVTYTVGSSSAVSFPAVQWRSI
NTPTRIDFTLASSEVRGYRLRIFVPLAQVSARPQIAVNARWNGPLPAAPNQPKTRGITRG
TTRGNNTLYEVDIPASALQVGSNRIEIGLASGSPDNGYLSPAVVFDSLQLVAL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgctccactccaccttgcgcatgctggcatgcgcgctgtgtctgtacggcggcgtcagc
gcaccggccatggccgcctttggattcacccgcagcggcgaccgcctggtggtggacacc
ggcgccgagctggtgttttcggtcaatgccaacaacggcgacatcgtgtcgatgcgctac
cgcgacaacgagctgcagaccaccgagtccaagggctcgcatatcgcctcgggcctgggc
agcgccagcgtggacgcgcgcctggtggacggggcgatcgtggtgtcggccaaggccggc
gatctgacccagtactacatcgcacgcaagggccggaatgcgatctacatggctacctac
gcaccgaccctgctgccggtgggcgaactacgcttcgtcgcgcgcttgaacgtcgccaag
ttgcccaccgcgcagcaggagcccgactccaatgtcggtaccatggtcgaaagcgaagac
gtgtttctgctaccggatgggcgcaccagctccaagttctattcggcgcggcgcatgatc
gacgatcaggtgcatggggtcagcggcgcgggggttgcagtgttcatgctgatgggcaac
cgcgagcgcagttccggcgggccgttcttcaaggacatcgccacgcaaaaaaccagcgtg
acgcatgagctctacaactacatgtattccgaccacacccagaccgaagcgtttcgcggc
ggcctgcatggcgtctacggtctgctgtttaccgatggcggcgcaccgagcagtgcgcag
ctgagcaccgactttgtcgatgccacgttgggggtgagcggctatctggccgacagcggg
cgtggtgcggtgagcgggcgggtcagcggcgtgctgtccggccagccggccgtaatcggc
ctgcgcaatgaccagacgcagtactgggccactgccaacggcagcggcgattaccaggtt
accggcgtgcgcccgggccgctaccgcatgacgctgtaccagaacgagctggaagtagcg
caacgcgatgtcgaagtattcgccaatgcgaccgcgcaggcggcattgcaggccgtggtc
ttgcccggcacgctgaaatggcagatcggtgtgcccgacggcacgccggccggatttcgc
catgccgacctgctgccgcgcgcgcatccttccgacacacgcatgcgctgggcgccggtc
acctacaccgtcgggtcgagcagcgcggtgagttttccggccgtacagtggcgcagcatc
aacacgccaacccggatcgacttcaccctggcgtccagcgaggttcgcggctatcgccta
cggattttcgtgccgctggcgcaggtcagcgcgcgcccgcagattgccgtcaacgcgcgc
tggaatggcccgcttcctgccgcacccaaccagccgaagacgcgcggcatcacccgtggc
accacgcgcggcaacaacacgctgtatgaggtggacatccccgcctcggcgctgcaggtc
ggcagcaaccgcatcgagatcgggcttgcatcaggatctccggacaacggctacctcagc
ccggcggtggtgttcgatagcctccagttggtggcgctctag
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