KEGG   Xanthomonas dyei: NYR95_18675
Entry
NYR95_18675       CDS       T09460                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
xdy  Xanthomonas dyei
Pathway
xdy00040  Pentose and glucuronate interconversions
xdy01100  Metabolic pathways
xdy02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:xdy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    NYR95_18675
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NYR95_18675
Enzymes [BR:xdy01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     NYR95_18675
SSDB
Motif
Pfam: Pectate_lyase_4
Other DBs
NCBI-ProteinID: WOB53328
LinkDB
Position
complement(4315147..4316280)
AA seq 377 aa
MKPKFSTAAAASLFVGSLLLTGVASADPALEVATTGWATQNGGTKGGSKAAGADIYTVTN
AADLKKALKASAGSNGRIIKISGIIDVSEGKPYTKTSDMKTRARLDIPTKTTLIGITSNA
EIREGYFYVKANDVIIRNLTIENPWDPEPVWDPDDGSAGNWNSEYDGLTVEGASNVWVDH
VTFTDGRRTDDQNGTANGRPKQHHDGAMDVKKGANFVTISYSAFKSHEKNDLIGSSDSAS
STDSGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGSTSNKVYPFSHAHGVGKESK
IFSERNVFEISGVSSCDKIAADYGGSVYRDQGSLLNGKALSCSWNSNIGWTPPYTYSLLS
ADKVAADVKAKAGAGKL
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgaagccgaaattttcgacggcggccgccgcgtcgctgtttgtcgggtcgttgctgctc
actggcgttgcaagcgccgatcctgcgctggaagtggcgaccactgggtgggcgacacag
aacggcggcaccaagggcggctccaaagctgctggtgccgatatctacacggtcactaac
gcggccgatctgaagaaggcgctcaaggccagcgcaggcagcaacggacgcatcatcaag
atcagcggcatcatcgatgtcagcgaaggcaagccttacaccaagacctcggacatgaag
acgcgtgcgcgtctggatatcccgaccaaaaccacgttgatcggcatcaccagcaacgcc
gaaatccgcgaaggctatttctacgtcaaggctaacgacgtcatcatccgtaacctcacc
atcgaaaatccatgggacccggagccggtttgggatccggatgacggtagcgccggcaac
tggaactccgagtacgacggcctgaccgtggaaggcgccagcaacgtgtgggtggaccac
gtgacctttaccgatggtcgccgcaccgacgatcagaacggcaccgccaacggccgcccc
aagcaacatcacgacggcgcaatggacgtcaagaagggcgccaacttcgtgaccatctcg
tactcggcattcaagtcgcatgagaagaacgacttgatcggctccagcgacagcgcttcg
agcaccgacagcggcaagctcaaggtgaccatccacaacaccttgttcgaaaacatctcc
gcgcgagccccgcgggtgcgttttggccaggtgcatttgtacaacaactaccacgtgggc
agcaccagcaataaggtctacccgttctcgcatgcgcatggcgtgggtaaggaatcgaag
atcttttccgagcgcaacgtgttcgagatcagtggcgtgagcagctgcgacaagatcgca
gccgactacggtggcagcgtatatcgcgatcagggctcgctgctcaatggcaaggccttg
agctgctcctggaacagcaatatcggttggactccgccttacacctacagcctgctgtcg
gccgacaaggtggctgcggacgtcaaggcaaaagccggcgccggcaagctgtaa

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