Xanthomonas dyei: NYR95_19170
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Entry
NYR95_19170 CDS
T09460
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy00010
Glycolysis / Gluconeogenesis
xdy00020
Citrate cycle (TCA cycle)
xdy00260
Glycine, serine and threonine metabolism
xdy00280
Valine, leucine and isoleucine degradation
xdy00310
Lysine degradation
xdy00380
Tryptophan metabolism
xdy00620
Pyruvate metabolism
xdy00630
Glyoxylate and dicarboxylate metabolism
xdy00640
Propanoate metabolism
xdy00670
One carbon pool by folate
xdy00785
Lipoic acid metabolism
xdy01100
Metabolic pathways
xdy01110
Biosynthesis of secondary metabolites
xdy01120
Microbial metabolism in diverse environments
xdy01200
Carbon metabolism
xdy01210
2-Oxocarboxylic acid metabolism
xdy01240
Biosynthesis of cofactors
Module
xdy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xdy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xdy_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
xdy_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
xdy_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NYR95_19170 (lpdA)
00020 Citrate cycle (TCA cycle)
NYR95_19170 (lpdA)
00620 Pyruvate metabolism
NYR95_19170 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
NYR95_19170 (lpdA)
00640 Propanoate metabolism
NYR95_19170 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NYR95_19170 (lpdA)
00280 Valine, leucine and isoleucine degradation
NYR95_19170 (lpdA)
00310 Lysine degradation
NYR95_19170 (lpdA)
00380 Tryptophan metabolism
NYR95_19170 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NYR95_19170 (lpdA)
00670 One carbon pool by folate
NYR95_19170 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xdy04147
]
NYR95_19170 (lpdA)
Enzymes [BR:
xdy01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
NYR95_19170 (lpdA)
Exosome [BR:
xdy04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
NYR95_19170 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl
Pyr_redox_3
GIDA
FAD_oxidored
DAO
HI0933_like
NAD_binding_8
AlaDh_PNT_C
FAD_binding_2
Thi4
FAD_binding_3
3HCDH_N
MCRA
2-Hacid_dh_C
DUF478
Amino_oxidase
GCV_H
Motif
Other DBs
NCBI-ProteinID:
WOB53411
LinkDB
All DBs
Position
complement(4423661..4425466)
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AA seq
601 aa
AA seq
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MAVIEIKVPDIGDYSDVPVIEVLVALGDSVAKDQGLVTLESDKATLEVPSSAAGVVKELK
VKIGDTLSEGAVVLLLETEGEAAAPAPAKAETKAAAPGSKPPVTPSHRAPAEPAAPKPAL
ASGKAADIDCKMVVLGAGPGGYTAAFRAADLGLDTVLIERYASLGGVCLNVGCIPSKALL
HAAAVIDEVAHAGDFGVDFGQPKITLDKLREYKEKVVGKLTGGLASMAKQRKVRTVTGVA
SFVSPNELEIVGDDGKTQLLRFEHCVIAAGSQAVKLPNFPWDDKRVMDSTDALELHDIPK
TLLVVGGGIIGLEMATVYSALGSKVTVVEFMDQLMPGADKDLVKPLADRLKKQGVEIHLK
TKATDVKADKSGITVSFEAAVEGEKPGLPATAFDRVLVAVGRSPNGKKIGAEKAGVTVTE
RGFIPVDRQMRTNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAGEKKEWVARVIPSVA
YTNPEIAWVGVTENEAKAKGLKVGVAKFPWAASGRAIGIGRTEGFTKLIFDEDTHRIIGG
AIVGVHAGDLLAEIGLAIEMGAEAEDIGHTIHAHPTLSESVGMAAEVYDGTITDLYIPKK
K
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcattgaaatcaaggttcccgacatcggcgattacagcgatgtccccgtcatc
gaagtgctggtcgccttgggcgacagcgtggccaaggaccagggcctggtcacgctggaa
tcggacaaggccacgctggaagtgccgtcctcggctgccggtgtggtcaaagagctcaag
gtcaagattggcgacaccttgtccgaaggcgccgtagtgctgctgctggaaaccgaaggc
gaggccgccgcgcctgcgcccgccaaggccgagaccaaggccgccgcacccggcagcaaa
ccgccggtgacgccgtcgcaccgcgccccggccgagccggcagcgcccaagccggcgctg
gccagcggcaaggccgcggatatcgactgcaagatggtggtgctcggtgccggcccgggc
ggctataccgccgcgttccgcgccgccgacctgggcctggacacggtgctgatcgagcgc
tacgccagcctcggcggcgtctgcctcaacgtcggctgcatcccgtccaaggcgctgctg
catgccgccgcggtgatcgacgaggtcgcacatgccggcgacttcggcgtggacttcggg
cagccgaagatcaccctggacaagctacgcgagtacaaggaaaaagtggtcggcaagctc
accggcggcctggccagcatggccaagcagcgcaaggtgcgcaccgtcaccggtgtggcc
agcttcgtctcccccaacgagttggagatcgtcggcgacgacggcaagacgcagctgctg
cgcttcgagcactgcgtcatcgccgccgggtcgcaggcggtgaagctgcccaacttcccg
tgggacgacaagcgcgtgatggactccaccgacgcgctggaactgcacgacattcccaag
accctgctggtggtcggcggcggcatcatcggcctggaaatggccacggtgtacagcgcg
ttgggcagcaaggtcactgtggtcgagttcatggatcagctgatgccgggcgccgacaag
gacctggtcaagccgctggccgaccgcctgaagaagcagggcgtggagatccatctcaag
accaaggccaccgacgtgaaggccgacaagagcggcatcaccgtgtccttcgaagcggcc
gtggagggcgagaagcccggtctgccggccaccgcgttcgatcgcgtgctggtggccgtg
ggccgctcgcccaacggcaagaagatcggcgcggagaaggcgggcgtcaccgtcaccgag
cgcggcttcatcccggtggaccggcagatgcgcaccaacgtgccgcacatcttcgccatc
ggcgacatcgtcggtaacccgatgctggcgcacaaggccacccacgaaggcaaactggcc
gctgaagtggcggccggcgagaagaaggaatgggtggcgcgggtgattccgtcggtggca
tacaccaacccggaaatcgcctgggtcggcgtcaccgagaacgaagccaaggccaagggc
ctgaaggttggcgtggccaagttcccgtgggccgccagcggccgcgcgatcggcattggc
cgcaccgaaggcttcaccaagctgatcttcgatgaagacacccaccgcatcatcggtggc
gccatcgtcggcgtgcatgccggcgacctgctggccgagatcggcctggccatcgagatg
ggcgccgaagccgaagacatcggccacaccatccacgcgcatccgaccctgagcgagtcg
gtcggcatggcggccgaggtgtacgacggcaccatcaccgacctgtacatcccgaagaaa
aagtaa
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