Xanthomonas dyei: NYR95_20120
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Entry
NYR95_20120 CDS
T09460
Name
(GenBank) O-antigen ligase family protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy00540
Lipopolysaccharide biosynthesis
xdy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NYR95_20120
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xdy01005
]
NYR95_20120
Enzymes [BR:
xdy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
NYR95_20120
Lipopolysaccharide biosynthesis proteins [BR:
xdy01005
]
Core region
NYR95_20120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
WOB53573
LinkDB
All DBs
Position
complement(4595333..4596610)
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AA seq
425 aa
AA seq
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MNSLRTQPASLPQSVPAASRAGVGIAELGVFTLTALVVSMPSGLAPFGLCLLLGSLVGWR
SLRAGIAARSGALRTVGWLTVVVIAMSLLSIALFEHGLRDVGNRSRFLVLPWAALWAYAL
QPRQVWLWRGALAGVAAAMAIAVLQVMKGADRAEGFTNAIVFADIAMMLLVVAAFCRPVG
AVRWLVGAAVAAVVVIVLSGSRGVWLALLATVGVLAWGAPWHSTRMRLLTFVGGAVLAVG
VVASVPALTDQMRLGELQSDLQRYEVGDSDSSAGARIERLHVAWDTVRAHPLTGVGVGRF
DDAMHELPVCAADNALFRCHLGHAHNDLAEWAATQGVPGLLLLIAVYGVPLWVFVRLHRR
SGQVQFRGPAAAGVMIVISYALCGLTQSMFAHQVAASFYSAMVGVLVGLAARQAQPAIPK
VVGNA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattgcgtacccagcccgcgtcgctcccgcagtccgtccccgccgcatcgcgc
gcgggcgtgggcatcgccgagctgggcgtgttcacgctgaccgcgctggtggtgagcatg
cccagcgggttggcgccgttcggcctgtgcctgttgcttggctctctggtcggttggcgt
agcctgcgggccggcatcgcggcgcgcagcggcgcgttgcgcacggtgggatggctgacg
gtggtggtgatcgcaatgtcgctgctgtcgatcgccttgttcgagcacggcctgcgcgat
gtgggcaatcgttcgcgctttctggtgctgccctgggcggcgctgtgggcctatgccttg
cagccgcgccaggtctggctgtggcggggcgcgctggccggcgtggccgcggccatggcg
atcgcggtgctgcaggtgatgaagggtgccgaccgtgcggaaggctttaccaacgccatt
gtgtttgccgacatcgcgatgatgttgctggtagtggcagcgttttgtcgtccggttggc
gcggtgcgctggctggtgggcgcagcggtcgcagcggtggtggtgatcgtgctcagcggc
agtcgcggcgtgtggctggcgttgctggccaccgtgggcgtactggcctggggcgcgccg
tggcatagcacgcgcatgcggctgctgaccttcgtcggcggtgcggtgctggcagtgggc
gtggttgccagcgtgcctgcgttgaccgaccagatgcgcctgggcgagttgcagagcgat
ctgcagcgctacgaagtgggcgacagcgattcgtccgccggggcccgcatcgagcgcctg
catgtggcctgggataccgtgcgtgcgcatccgctgaccggcgtcggcgtgggccgattc
gacgatgcgatgcacgagttgcctgtgtgcgccgcggataacgcgttgtttcgctgccat
ctaggccatgcgcacaacgatctggccgaatgggccgccacccagggcgtgcccgggctg
ttgctgctgattgcggtctatggcgtgccgctatgggtgtttgtgcgcttgcatcggcgc
agcgggcaggtgcagttccgcgggccggcggcggctggggtgatgatcgtgatcagctat
gcgctgtgcgggttgacccagtcgatgttcgcgcaccaggtggcggcgagcttctactcg
gcaatggtgggcgtcctggtgggcctggccgcgcgtcaggcgcagccggcaataccgaag
gttgtcggcaacgcgtag
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