Xanthomonas dyei: NYR95_20130
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Entry
NYR95_20130 CDS
T09460
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
xdy
Xanthomonas dyei
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xdy03009
]
NYR95_20130 (rsmB)
Enzymes [BR:
xdy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
NYR95_20130 (rsmB)
Ribosome biogenesis [BR:
xdy03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NYR95_20130 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_25
FtsJ
MTS
Methyltransf_12
Methyltransf_5
Methyltransf_33
Motif
Other DBs
NCBI-ProteinID:
WOB53575
LinkDB
All DBs
Position
complement(4598534..4599844)
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AA seq
436 aa
AA seq
DB search
MAADTAAAGVASRLAAAKVLTAVFDQGRSLKAELTAALPGIADPRDRALVEAICFAVLRR
RPAYDVALRQWLERPLPPRDAELKALLMAGFAQLDVLQLPAHAALSATVEACRALGRPRQ
AGMVNAILRRAQREGFPAVSDDAGWPSWLRKQLRADWGERAEAIFVASAQMAPMWLRVHR
GRTDPAAYVARLAEVGISAQTDTVLPDALRLHSAVPVSQLPGFAEGDVSVQDGSAQQVAD
ALTLTPAARVLDACAAPGGKAAHLLERYPQLQLTALDVDARRLERVQQTLHRTVPNAQVA
LHAADAADPAAWWDGQPFDAVLLDAPCSATGVVRRQPDVLLHRRADDIDALCALQARLLH
ASWRTLRPGGQLLYTTCSLLARENQGQVEAFLQRTPDAQAQPLGAQFGHAAGPGRQRFPG
EQHCDGFFYALLLKAS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgacaccgcggcggccggcgtcgcctcacggctggcggcagcgaaagtgctc
acggccgtgttcgaccagggccgttcgctgaaggccgaactgaccgctgcgctgcctggc
attgccgatccgcgcgatcgcgcgctggtggaggcgatctgttttgcagtgctgcggcgc
cgcccggcctacgacgtcgccttgcggcaatggctggagcggccgctgccgccgcgcgat
gccgaactcaaggcattgttgatggccggcttcgcccagctcgacgtattgcaactgcca
gcgcacgcggcgctgtctgccaccgtggaggcgtgtcgcgcgctgggccggccgcgccag
gccggcatggtcaacgcgatcctgcggcgtgcgcagcgcgaaggatttccggcggtctcg
gacgatgccggttggccgtcgtggttgcgcaagcagctgcgtgccgattggggcgagcgg
gccgaagcgatcttcgtcgcaagcgcgcagatggcgccgatgtggctgcgcgtgcatcgc
gggcgcaccgatccagccgcctatgtggcgcggctggcagaggtgggcatctccgcacag
accgacacggtgctgcctgatgcgctgcggttgcacagtgcggtgccggtgagccagttg
ccgggctttgccgagggcgatgtctcggtgcaggacggctctgcgcagcaagtggccgat
gcgctgacgctgacaccggcggcgcgggtactcgatgcctgcgctgcgcccggtggcaag
gcggcgcatctgctggagcgttacccgcagttgcagctcaccgcgctggatgtggatgcg
cgccggctggagcgcgtgcaacagacgttgcatcgcaccgtgccgaacgcgcaggttgcg
ttgcatgcggccgatgctgccgacccggccgcctggtgggacggtcagcccttcgatgca
gtactgctggatgcgccgtgttcggccaccggcgtggtgcgtcgtcagccggatgtgctg
ctgcaccgtcgcgccgacgacatcgatgcgctgtgcgccctgcaggcgcgtctgctgcat
gcgagctggcgcacgttgcgtccgggcggccagctgctctacaccacctgctcgctgctg
gcgcgcgagaaccaggggcaggtcgaggccttcctgcaacgcacgccggatgcgcaggcg
cagcccttgggtgcgcagttcggccatgcggcgggcccgggacgtcagcggtttcctggc
gagcagcactgcgacggtttcttctacgcgcttttgctaaaagcttcctga
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integrated database retrieval system
