Xanthomonas dyei: NYR95_20255
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Entry
NYR95_20255 CDS
T09460
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
xdy
Xanthomonas dyei
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xdy03021
]
NYR95_20255 (rpoH)
Transcription machinery [BR:
xdy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NYR95_20255 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Phage_terminase
IF2_N
KORA
HTH_3
HTH_11
UCR_14kD
HTH_10
HTH_25
GntR
Motif
Other DBs
NCBI-ProteinID:
WOB53599
LinkDB
All DBs
Position
complement(4627310..4628185)
Genome browser
AA seq
291 aa
AA seq
DB search
MNQTTSTALVANNLPIPSALGSLDAYIGAVHQIPVLSVDEEQNLARRFRDELDLDAAREL
VHSHLRFVVHVARGYNGYGLPLGDLIQEGNIGLMKAVKRFDPEMGVRLVSFAVHWIRAEM
HEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWLNASEVTAVAKDLNVSEREVMEMES
RLSGRDIGFDASSDEDDDHGPPSPVSYLVANEEDPSQAYERHDSEDNQLQLLREGMAGLD
TRSRDIVKRRWLDSESKVTLQELADEYGVSAERIRQIEANALKKMKALFVA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagactacctcgactgcccttgtggcaaacaatctcccgattcccagtgcgctc
ggttcgctggacgcctacatcggtgccgtgcaccagatcccggtgctgtcggtcgatgag
gaacagaatctggcccgccgcttccgcgacgagctggacctggacgcagcgcgcgaattg
gtccattcccacctacgcttcgtggtgcacgtggcccgcggctacaacggttacggcctg
ccgctgggcgacctgatccaggaaggcaatatcggcctgatgaaggcggtcaagcgcttc
gacccggaaatgggcgtgcgcctggtcagcttcgcagtgcattggatccgtgccgaaatg
cacgagttcattttgaagaactggcgcatcgtcaaggtcgccacgaccaaggcgcagcgc
aagttgttcttcaacctgcgcaagtccaagacccgtctgggctggctcaacgcctccgaa
gtgaccgcggtcgccaaggacctgaacgtctccgagcgtgaagtgatggagatggagtcg
cgcctgtccggccgcgatatcggcttcgacgcgtcgtcggatgaagacgacgatcatggt
ccgccgtcgccggtcagctacctggtggccaacgaagaagatccctcgcaggcctatgag
cggcacgatagcgaagacaaccagctgcagttgctgcgcgaaggcatggctggtctggat
acgcgctcgcgcgacatcgtcaagcgacgttggctggattcggagtccaaggtaacgctg
caggagctggccgacgaatacggcgtgtcggccgagcgcatccgccagatcgaggcgaac
gcgctgaagaagatgaaggcgctgttcgtcgcctga
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