Xanthomonas dyei: NYR95_20315
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Entry
NYR95_20315 CDS
T09460
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy00020
Citrate cycle (TCA cycle)
xdy00480
Glutathione metabolism
xdy00720
Other carbon fixation pathways
xdy01100
Metabolic pathways
xdy01110
Biosynthesis of secondary metabolites
xdy01120
Microbial metabolism in diverse environments
xdy01200
Carbon metabolism
xdy01210
2-Oxocarboxylic acid metabolism
xdy01230
Biosynthesis of amino acids
xdy04146
Peroxisome
Module
xdy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xdy_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NYR95_20315
09102 Energy metabolism
00720 Other carbon fixation pathways
NYR95_20315
09106 Metabolism of other amino acids
00480 Glutathione metabolism
NYR95_20315
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NYR95_20315
Enzymes [BR:
xdy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
NYR95_20315
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Gene cluster
GFIT
Motif
Pfam:
IDH
DUF1843
CAMP_factor
Motif
Other DBs
NCBI-ProteinID:
WOB53611
LinkDB
All DBs
Position
complement(4640327..4642558)
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AA seq
743 aa
AA seq
DB search
MSKTPKILYTLTDEAPFLATQSLLPIIDAYTDTAGIVVETRDISLAGRILSLFPESLTDA
QKIADDLAELGELATTPEANIIKLPNISASVPQLKAAIAELQSQGYALPAYPDEPKDAAE
KDIKTRYDKVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHRMGKWSSDSRSHVAHMDDG
DFFGSEQSTTLAEAGTLKIEFVAADGSSSVLKDKVAVKAGEIVDAAVLSKRALASFIDAQ
IADAKAKDVLFSVHLKATMMKVSDPVLFGVVVGEFYKDTLSKHAEVLKSVGFDPNNGIGD
LYARIGTLPDAQQAQIKADIQAEYAQRPGLAMVNSDKGITSLHVPSDVIVDASMPAMIRD
SGQMWNAQGKLQDTKAVIPDRCYAGVYQAVIDDCRTHGAFDPSTMGSVPNVGLMAQKAEE
YGSHDKTFQLSAAGTVKVTDANGNTVFEHAVEAGDLWRMCQVKDAPIQDWVKLAVERARL
SDTPAVFWLDKARAHDAQVIAKVETYLKDHDTNGLDIRILPPVEATTFSLERIRKGQDTI
SVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGLFETGAGGSAPKHVQQFVEENCL
RWDSLGEFLALAASLEHLGNRYNNPSATVLAKALDVANGQFLDNNKSPARKVGELDNRGS
HFYLAMYWAQALAAQTEDTALQAKFAPLAKALTENEATIVAELNGAQGRPVEIGGYYHPD
LAKVSEAMRPSKTFNDVLTTLKA
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagacaccgaagatcctctacacgctcaccgacgaagctcccttcctggccacg
cagtcgctgctgccgatcatcgatgcctacaccgataccgccgggatcgtggtcgaaacg
cgcgatatctcgctcgccggtcgcattctgtcgttgttccccgagagcctgaccgacgcg
cagaagatcgccgacgacctcgcagaactgggcgaactggccaccacgccggaagccaac
atcatcaagctgcccaacatcagcgcctcggtgccgcagctcaaggccgcgatcgccgaa
ctgcagagccagggttatgcgttgccggcgtatccggacgagcccaaggatgccgcagaa
aaagacatcaagacgcgctacgacaaggtcaagggcagtgcggtgaatccggtgctgcgc
gaaggcaattccgatcgccgcgcaccgctgtcggtcaagaactacgcacgcaagcatccg
caccgcatgggcaagtggagcagcgactccaggtcgcacgtggcgcacatggacgacggc
gatttcttcggcagcgaacagtccaccacgctggccgaggccggcacgctgaagatcgaa
ttcgtcgctgccgatggcagcagcagcgtgctcaaggacaaggttgcagtaaaggccggc
gagatcgtcgatgccgcagtgctgagcaagcgtgcgctggccagcttcatcgatgcgcag
atcgccgatgccaaggccaaggatgtgctgttctcggtgcatctgaaagccaccatgatg
aaggtctccgacccggtgctgttcggcgtggtggtcggcgagttctacaaggacacgctg
agcaagcacgccgaggtgctcaagtcggtcggcttcgatcccaacaacggcatcggcgat
ctgtacgcccgcatcggcacgttgcctgacgcgcagcaggcgcagatcaaggccgatatc
caggccgaatacgcgcagcgcccggggctagcgatggtcaattcggacaagggcatcacc
agcctgcatgtacccagcgacgtcatcgtcgacgcctcgatgccggcgatgattcgcgac
tccggccagatgtggaatgcgcaaggcaagctgcaagacaccaaggcggtgattccggac
cgttgctatgccggcgtgtatcaagcggtgatcgacgactgccgcacgcatggcgctttc
gacccgtccaccatgggctcggtgcccaacgtcggcctgatggcgcagaaggccgaagaa
tacggctcgcacgacaagactttccagctgtcggctgccggtaccgtcaaggtcaccgat
gccaatggcaacaccgtgttcgagcatgcggtggaagccggcgatttgtggcgcatgtgc
caggtcaaggacgcgccgatccaggactgggtgaagctggcggtcgagcgtgcacgcctg
agcgataccccggccgtattctggctggacaaggcgcgcgcgcacgacgcgcaggtcatc
gccaaggtcgagacatacctcaaggatcacgacaccaacggcctggatatccgcatcctg
ccgccggtggaagccaccacgttctcgctggagcgcatccgcaagggccaggacaccatc
tctgtcaccggcaacgtgctgcgcgattacctcaccgacctgttccccatcatggagctg
ggcaccagcgccaagatgctctccatcgtgccgctgatggccggtggcggcctgttcgaa
accggtgcaggcggttcggcgcccaagcacgtgcagcagttcgtcgaagagaactgcctg
cgctgggattcgctgggcgaattcctggcgctggccgcgtcgctggaacatctgggcaac
cgctacaacaatccgtcggccaccgtgctggccaaggcgctggacgtggccaacggccag
ttcctggacaacaacaagtcgccggcgcgcaaggtgggcgagctcgacaaccgcggcagc
catttctatctggcgatgtattgggcgcaggccctggccgcgcaaaccgaagacaccgca
ttgcaggccaagttcgcaccgctggccaaggcgctgaccgagaacgaagccaccatcgtg
gccgagctcaacggcgcacagggcaggccggtggagatcggtggttactaccacccggac
ctggccaaggtcagcgaggcgatgcgtccgagcaagaccttcaatgacgtgctgaccacg
ttgaaggcctga
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