Xanthomonas dyei: NYR95_21630
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Entry
NYR95_21630 CDS
T09460
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy03030
DNA replication
xdy03410
Base excision repair
xdy03420
Nucleotide excision repair
xdy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NYR95_21630 (polA)
03410 Base excision repair
NYR95_21630 (polA)
03420 Nucleotide excision repair
NYR95_21630 (polA)
03440 Homologous recombination
NYR95_21630 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xdy03032
]
NYR95_21630 (polA)
03400 DNA repair and recombination proteins [BR:
xdy03400
]
NYR95_21630 (polA)
Enzymes [BR:
xdy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NYR95_21630 (polA)
DNA replication proteins [BR:
xdy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NYR95_21630 (polA)
DNA repair and recombination proteins [BR:
xdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NYR95_21630 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NYR95_21630 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Terminase_6
Motif
Other DBs
NCBI-ProteinID:
WOB53837
LinkDB
All DBs
Position
complement(4922615..4925395)
Genome browser
AA seq
926 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPAYVAFVVDAPG
KTFRDDLYADYKANRPSMPDELRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQAA
ADGLSVTISTGDKDFAQLVRPGIELVNTMSGSRMDSDEAVIAKFGVRADQIVDLLALMGD
AIDNVPGVDKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGENLRAALPRLPLNRALVTI
KTDVALASGPRALELREPNAETLAALYARYGFSQALRELGGTAAAGVQTDAMAVARTEPG
RARGTGFVSGPASAPVDLDPALAAPGQYETILTQQQLDSWITRLRAAGQFAFDTETDSLD
PLQANLIGLSVAAEPGQAAYLPFGHDFPGAPVQLDRAQALAQLAPLLTDPALRKFGQHGK
YDLHVMRRHGVELAGYSDDTLLESFVLNSGSARHDMDSLAKRYLGYDTVKYEDVCGKGAK
QIKFAQVSLEDATRYAAEDADITLRLHQVLGPKLAAEPGLERVYREIEMPLVEVLARIEA
NGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVKT
PKGQPSTNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMIHPQSGRVHTSYHQA
GAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPPGRKLIACDYSQIELRIMAHLSGDPG
LVGAFESGADVHRATAAEVFGRTIDTVSNDERRAAKAINFGLMYGMSAFGLARQLGIGRG
EAQDYIALYFSRYPGVRDFMDTTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGAERA
AINAPMQGTAADIIKRAMVSVDGWIADHAQRALMILQVHDELVFEADTDFVDTLLSEVTA
RMSAAAELRVPLVVDSGVGDNWDQAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgatgggtccagttacctgtaccgcgcgttccacgcgctt
ccgccgctgaccaatgcccagggcgagcccaccggtgcgttgttcggcgtggtcaacatg
ctgcgtgccaccttgaaggaacgccccgcctacgtcgcgttcgtggtggacgcgccgggc
aagacatttcgtgatgacttgtatgccgactacaaggccaaccgcccctcgatgcccgac
gagttgcgcgcacaggtgcagccgatgtgcgacatcgtgcatgcgctgggcatcgatatc
ctgcgcatcgacggcgtggaagcggacgatgtgatcggcacgctggcgctgcaggccgcc
gcagacggattgagcgtcaccatctctaccggcgacaaggacttcgcgcagctggtgcgt
ccgggcatcgaactggtcaacaccatgagcggcagccgcatggattcggacgaggcggtg
atcgccaagttcggtgtgcgggccgaccagatcgtcgacctgctggcgctgatgggcgat
gccatcgacaacgtgcccggcgtggacaagtgcggccccaagaccgccgccaaatggctg
gccgaatacgactcgctcgacggcgtcatcgccaacgccgacaagatcaagggcaagatc
ggcgagaacctgcgcgccgcactgccgcggctgccgctcaaccgcgcgttggtcaccatc
aagaccgacgtggcgttggccagcggcccgcgcgcgctggagctgcgcgagcccaatgcc
gagaccctggctgcgctctatgcccgctacggcttcagccaggccctgcgcgagctgggc
ggcacagcggccgccggcgtgcagaccgacgccatggccgtggcgcgtaccgaacccggc
cgcgcccgcggcaccggcttcgtctccggcccggccagcgcgccggtggatctggacccg
gccctggccgcgcccggtcagtacgagacgattctcacccagcaacagctcgacagctgg
atcacccgcctgcgcgcggccggccagttcgctttcgataccgaaaccgacagcctggac
ccgctgcaggccaacctgatcggcctcagcgtcgctgccgagcccggccaggcggcgtac
ctgccgttcggccacgacttccccggcgcgccggtccagctcgaccgcgcccaggcgctg
gcccagctggcgccgctgctcaccgaccctgcgctgcgcaagttcggccagcacggcaag
tacgacctgcacgtgatgcgccggcatggcgtggagctggccggctacagcgacgacacc
ttgctggagagcttcgtgctcaattccggcagcgcccgccacgacatggacagcctggcc
aagcgctacctgggctacgacacggtcaagtacgaagacgtgtgcggcaagggcgccaag
cagatcaagttcgcccaggtcagcctggaagatgccacccgctacgccgccgaagacgcc
gatatcaccctgcgcctgcaccaggtgctcggccccaagctggccgccgagccggggctg
gagcgcgtctaccgcgagatcgagatgccgctggtggaagtgctcgcccgcatcgaggcc
aacggcgtgtgcgtggacgcggccgaactgcgccgccagagtgcggacctgtccaagcgg
atgctcgccgcccagcaaaaggccaccgagctggccgggcgcaccttcaacctggattcg
cccaagcagctgcaggcgctgctgttcgacgagctcaagctgcccgccgtggtcaagacg
cccaagggccagccctcgaccaacgaagaagcgctggaagccatcgccgaccagcacgag
ttgccgcgggtgatcctggaataccgcggcctggccaagctgcgcagcacctacaccgac
aagctgccggagatgatccacccgcagtccgggcgcgtgcacaccagctaccaccaggcc
ggcgccgccaccgggcggctgtcctcgtccgaccccaacctgcagaacatcccgatccgc
accgaagacggccgccgcatccgccgcgccttcgtcgccccgcccgggcgcaagctgatc
gcctgcgactactcgcagatcgaactgcgcatcatggcccacctgtccggcgaccccggc
ctggtgggcgcgttcgagtccggcgccgacgtgcaccgcgccaccgccgccgaagtgttc
ggccgcaccatcgacaccgtcagcaacgacgaacgccgcgccgccaaggcgatcaacttc
gggctgatgtacggcatgagcgcgttcggcctggcccgccagctcggcatcggccgtggc
gaggcgcaggactacatcgcgctgtacttcagccgctacccgggcgtgcgcgacttcatg
gacaccacccgccagcaggcccgcgacaagggctacgtggagacggtgttcggccgccgg
ctgtatctggacttcatcaatgccggcagccagggccagcgcgccggtgccgagcgtgcc
gcgatcaacgcgcccatgcagggcaccgccgccgacatcatcaagcgcgccatggtcagc
gtggatggctggatcgccgaccacgcgcagcgcgccctgatgatcctgcaggtgcacgac
gaactggtgttcgaagccgacaccgatttcgtcgacacgctgctgagtgaagtgaccgcg
cgcatgtcggccgctgctgaattacgcgtgccgctggtggtggattcgggcgtgggcgat
aactgggatcaggcgcactga
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