Xanthomonas dyei: NYR95_21895
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Entry
NYR95_21895 CDS
T09460
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy03420
Nucleotide excision repair
xdy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NYR95_21895 (uvrD)
03430 Mismatch repair
NYR95_21895 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xdy03400
]
NYR95_21895 (uvrD)
Enzymes [BR:
xdy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NYR95_21895 (uvrD)
DNA repair and recombination proteins [BR:
xdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NYR95_21895 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NYR95_21895 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
WOB53882
LinkDB
All DBs
Position
complement(4986486..4988672)
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AA seq
728 aa
AA seq
DB search
MDVSHLLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAV
TFTNKAAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQL
RLVKRVVQSLELDESKYPPKQMSWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQE
RCDRSGLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGE
TGHVFVVGDDDQAIYGWRGAKVENVQKFLKDFPGAQTVRLEQNYRSSANILGAANAVIAH
NPYRIGKQLWTDSGDGDPIDLYAAYNEVDEARYAVERARQWVRDGGSYGEVAVLYRSNAQ
SRALEEALISEQLPYRVYGGMRFFERAEIKDALAYLRLLTNRSDDAAFERAVNTPTRGIG
DRTLDEVRRLARANALSLWEAAMLATQENSLAARARNALATFLSLVGQLHAETGQMELAE
RIDHVLMRSGLREHWAKESRSGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFL
AYASLEAGEGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSSRSLEESGRLEEE
RRLAYVGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRELLNEVRPKVQVSRTAS
LGAARGGQVHGIVETAPIKLGANVEHPTFGGGVVVDYEGNGAHARVQVQFDEVGAKWLVM
AYANLTVM
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctctcatttgctcgatcatttaaaccccgcccagcgcgaggccgtttccgcg
ccgccggggcattacctcgtgctggccggcgccggctccggcaagacgcgcgtgctgatc
catcgcatcgcctggctcaacgaagtccagggcgtgcccaaccacggcatctttgcggtg
accttcaccaacaaggccgccggcgagatgcgtcaccgcaccgacctgcagctgcgtaac
ggcagccgcgggatgtggatcggcaccttccatgggctggcgcatcggctgttgcgcctg
cattggcaggacgcgcggctgcccgaaggcttccaggtcatggacagcgacgaccagctg
cggctggtcaagcgcgtggtgcagtcgctggagctggacgagagcaagtatccgcccaag
cagatgagctggtggatcaacgagcagaaggacgaaggccgccgcccgcagcatatccag
cccgagcccaacgacgattggaccgaggtgcgccggcaggtgtatgcggcctatcaggaa
cgttgcgaccgctccgggctgctggatttcgccgagctgctgctgcgcgcgcacgaactg
ctgcgcgacaccccggcattgctggcgcattaccgggcacgctttcgcgaaattctggtg
gacgagttccaggacaccaacgccatccagtacgccttcgtgcgcgtgctggccggcgag
accgggcatgtgttcgtggtcggcgacgacgaccaggcgatctatggctggcgcggtgcc
aaggtcgagaacgtgcagaagttcctcaaggatttccccggcgcgcaaacggtgcggctg
gagcagaactaccgttccagcgccaatatccttggcgcggccaatgcggtgatcgcgcat
aacccgtaccgtatcggcaagcagctgtggaccgattccggcgatggcgacccgatcgat
ctgtacgcggcctacaacgaggtggacgaggcgcgctatgcggtggagcgtgcgcgccag
tgggtgcgcgatggcggcagctacggcgaagtggcggtgctgtatcgcagtaatgcgcaa
tcgcgcgcgctggaagaagcgctgatttccgagcaattgccgtaccgcgtgtatggcggc
atgcgctttttcgagcgcgccgaaatcaaggatgcgctggcctacctgcgcctgctcacc
aaccgcagcgacgatgccgccttcgaacgcgcggtcaatacgcccacgcgtggtatcggc
gaccgcacgctggacgaagtgcgccggctggcacgcgccaatgcgttgtcgttgtgggaa
gcggcaatgctggccacgcaggaaaacagcctggctgcgcgtgcgcgcaatgccttggcg
accttcctgagcctggtcggccagttgcatgccgaaaccgggcagatggagctggccgaa
cgcatcgaccacgtgctgatgcgctcgggcttgcgcgagcattgggccaaggaaagccgc
agcgggctggattcggaatcgcgtaccgagaacctggacgaactggtgtcggtggcctcg
cgcttcacccggccggacgacgaagacagccagggcatgaccgagctggttgcgtttctg
gcgtacgcctcgctggaagccggcgaaggccaggcgcaggccggcgaagaaggcgtgcag
ttgatgacgctgcattcggccaagggtctggagtttccgatcgtgtttctggtcggcctg
gaagatggcttgtttccgagttcgcggtcgctggaagaaagcggccggctggaagaagaa
cggcgtctggcgtatgtgggcatcacccgcgcacggcagaagctggtgctgtgctacgcc
gaatcgcgccgtatccacggccaggacaactacaacgtcccatcgcggttcttgcgcgag
atcccgcgcgagctgctgaacgaagtgcgccccaaggtgcaggtttcgcgcaccgcctcg
ttgggcgcagcacgtggcgggcaggtgcacggaatcgtggagaccgcgccgatcaaactc
ggcgccaatgtcgagcatcctaccttcggcggcggcgtggtcgtcgattacgaaggcaac
ggtgcgcatgcgcgcgtgcaggtgcagttcgacgaggtaggcgccaaatggctggtgatg
gcgtacgcgaatctgacggtgatgtag
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